Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2003 ATGGGTAACAACAGGTTCAAGTTATCAGATATGATACCAAATGCTTGGTTTTACAAGCTGAAAGACATGAGCAAATCAAGGAAGAGAAATGGTTCTCATGCTATGAAGAGTAAAGTGTCTTCACCACCAACAACAACAACATCACAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCACTGAGCCTATTAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTGGACATGCCATTCACTGATTCACCTAGAAGGTCTTCCAAGAGAAGGGCTAGGAGAAAAACCATCTACAAGCCTTCTCCCACCGTTGTTTCGTCCTCTTTCATTCCCTCTTCCGGCTATGACTCCGCGAATCATTGGATCAAGCCATGCCAGGTTCAGTCACCAGATTATGATGTGTCTTCAGCTGAAAGCTCTTCTGAGTCTGATCTTCATGAGTATGCTTATTCAGAGTCTGAATGTGACAGCTTTTCTGTTCCTGATTTGCTTAATGGAATGGACACTAATTGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAGTGAGTCCTTCCTTGGGAATCCAGAAAAGCAAGATGGGTTTGATGCAATTTCACAGCTTGGTCTTGCTCCAATATTGACAAGGCCAGTGAAGTTTGATGATAAGGTCATCGAAGCCGCTGAGGTGAGAAGTTCAACTGATTTGGATGAAATGCAGGATGATCAGTCTTTCTCAATTGAGATTAACAAAGAGGAAAGCATTAGAACTCAAAGGAGGAGGAAAAGCAATCATAGAAAGCCCTTTGCTAATTCTGCAGGCATAAGGCTTAGAGTCAATTCTCCAAAACTTGCAAGCAGAAAAGTTCAAGCATGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAAAGGTTCAAGGAGTACAGGCTTTCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAAAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGCGCATCGAAGGATTTGGAGGACTTACTTGCTTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAGGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTAAGAATGTAA 1152 0.4227 MGNNRFKLSDMIPNAWFYKLKDMSKSRKRNGSHAMKSKVSSPPTTTTSQRSLPRYSHYFSTEPIRAGKLYNTPIHTKDLDMPFTDSPRRSSKRRARRKTIYKPSPTVVSSSFIPSSGYDSANHWIKPCQVQSPDYDVSSAESSSESDLHEYAYSESECDSFSVPDLLNGMDTNCSCRVSSSTNDIIIDMNSESFLGNPEKQDGFDAISQLGLAPILTRPVKFDDKVIEAAEVRSSTDLDEMQDDQSFSIEINKEESIRTQRRRKSNHRKPFANSAGIRLRVNSPKLASRKVQACARRSVSSTASKGSRSTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2003 383 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Gso2g2003 383 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 316 379 IPR006458 -
Gso2g2003 383 MobiDBLite consensus disorder prediction 27 56 - -
Gso2g2003 383 MobiDBLite consensus disorder prediction 76 98 - -
Gso2g2003 383 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Gso2g2003 383 MobiDBLite consensus disorder prediction 35 56 - -
Gso2g2003 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 382 IPR038933 GO:0045892
Gso2g2003 383 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 382 - -
Gso2g2003 383 Pfam Transcriptional repressor, ovate 322 378 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2003 Gso-Chr2 44460724 44462280 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso2g2003 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2003 - - gmx:100780926 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1719 14 49312142 49313498 Gso2g2003 2 44460724 44462280 GST
Gso18g0477 18 4789745 4791279 Gso2g2003 2 44460724 44462280 PCT
Gso2g2003 2 44460724 44462280 Gso18g0477 18 4789745 4791279 PCT