Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2000 ATGGAGCATCAATTGATCACATTCTTGTCCTTTCTTCTATATTCACTAAGTTTCATCCTTTTTCTTTTCCAGATTTTGAAAGTGGGAAAGAGATCCAAAGTGAAAACAATGAACCTTCCCCCAGGGCCATGGAAGTTACCTATCATTGGAAGCATACACCACATGATTGGCTTTCTACCCCATCACCGTTTGAGAGAGCTAGCCCTAAAACATGGCCCTCTCATGCACCTAAAACTTGGTGAGGTACCAGCCATTGTGGTTTCTTCTCCAGAAGTTGCCAAAGAAGTGATGAAAACCTATGATTCCATCTTTGCTCAAAGACCCCATCAAGTTGGTGCAGACATCATGTGCTATGGTTCCACTGATATTGCCACTGCACCATTAGGAGGCTATTGGAAGCAGCTTAGAAGAATATGCTCACAAGAGCTTCTTAGCAACAAACGTGTGAGGTCATATCAATCAATAAGAGAAGAAGAAGTGCTGAATTTGATGAGACTTGTTGATGCCAACACTAGATCTTGTGTGAACCTTAGTGAGAAAGTGTCTTGCATGACAAGTGCCATCACTGCTAGGGCAACTTTCGGTGAAAAATGCAAGGACCAAGAAGATTTCATTTCCCTTGTCAAGAAACTTCTGAAACTTGTCGAACGTTTATTTGTTTTTGACATTTTCCCTTCTCACAAGTGGCTTCATGTGATCAGTGGGGAGATATCTAAACTGGAGGAGTTGCAGAGAGAATATGATATGATCATTGAAAACATCATTAGAAAGGCAGAAAAAAAGACTGGTGAAGTAGAAGTGGATAGTCTCCTCTCTGTTCTTCTAAATATTAAAAATCATGATGTCCTTGAATATCCTTTGACAATCGACAACATCAAAGCTGTAATGTTGAACATGTTTGGTGCTGGAACTGATACATCATCAGCAGTTATAGAATGGACCATGTCAGAGATGCTGAAAAACCCTAGAGTAATGACCAAAGCTCAAGAAGAAGTTAGAAGAGTATTTGGTAGCAAAGGATACACCAACGAAGCAGCACTTGAAGACCTAAAGTTTCTGAAAGCAGTAATCAAAGAAACACTTAGATTGCACCCTCCTTTCCCTCTTCTTCTTCCAAGAGAATGTAGAGAAACTTGTGAGGTCAAAGGGTACACAATACCTGCTGGGACCAAAGTGATAGTGAATGCATGGGCTATTGCAAGAGACCCTAAGTATTGGTCTGAAGCAGAAAAGTTTTATCCAGAGAGATTCATGGATTCTCCAATTGATTATAAAGGTTCCAATCATGAACTCATACCCTTTGGTGCTGGAAGGAGAATATGTCCTGGCATTTCTTTTGGTGTATCTAGTGTTGAACTTTGTCTTGCACAGCTACTTTACTATTTTAATTGGGAACTGCCAAATGGAAACAAGGAAAACGACTTGGAAATGACTGAAGCTTTGGGGGCCTCTTCAAGAAGGAAAACGGATCTGGTCTTAGTTCCCATTTCTTACAATCATGTTCCTGTTTCATATATAAGACCTTAA 1527 0.4014 MEHQLITFLSFLLYSLSFILFLFQILKVGKRSKVKTMNLPPGPWKLPIIGSIHHMIGFLPHHRLRELALKHGPLMHLKLGEVPAIVVSSPEVAKEVMKTYDSIFAQRPHQVGADIMCYGSTDIATAPLGGYWKQLRRICSQELLSNKRVRSYQSIREEEVLNLMRLVDANTRSCVNLSEKVSCMTSAITARATFGEKCKDQEDFISLVKKLLKLVERLFVFDIFPSHKWLHVISGEISKLEELQREYDMIIENIIRKAEKKTGEVEVDSLLSVLLNIKNHDVLEYPLTIDNIKAVMLNMFGAGTDTSSAVIEWTMSEMLKNPRVMTKAQEEVRRVFGSKGYTNEAALEDLKFLKAVIKETLRLHPPFPLLLPRECRETCEVKGYTIPAGTKVIVNAWAIARDPKYWSEAEKFYPERFMDSPIDYKGSNHELIPFGAGRRICPGISFGVSSVELCLAQLLYYFNWELPNGNKENDLEMTEALGASSRRKTDLVLVPISYNHVPVSYIRP* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2000 508 Coils Coil 240 260 - -
Gso2g2000 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 500 - -
Gso2g2000 508 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 SUPERFAMILY Cytochrome P450 40 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PANTHER CYTOCHROME P450 71B11-RELATED 10 500 - -
Gso2g2000 508 Pfam Cytochrome P450 40 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gso2g2000 508 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2000 508 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2000 Gso-Chr2 44443605 44446197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2000 30 482 Cytochrome P450 AT3G48310 40.308 5.79e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2000 - K23807 gmx:100779851 979.548