Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1997 ATGGTCTCCGCTGAAAAACCAATGCCAGAAACCGAACACGCGGCGGCGGAGAACAACACCAACACCGCCCTGTTTGGAAAATACGAGGTCGGAAGGCTCCTAGGATGCGGCGCGTTCGCGAAGGTTTACCACGCGCGCAACACCGAGACTGGCCATAGCGTTGCCGTTAAAGTCATAAGCAAAAAAAAGCTGAACTCGTCAGGTTTAACCTCCAACGTGAAACGCGAGATTTCCATCATGAGCCGCCTCCACCACCCCAACATCGTGAAACTCCATGAAGTGCTGGCGACAAAAACAAAGATCTACTTCATCTTGGAATTCGCGAAAGGCGGCGAGCTCTTCGCGAGAATCGCCAAAGGCCGATTCAGCGAAGATCTCGCGAGACGATGTTTTCAGCAATTAATCTCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACCTGAAGCCGGAGAATCTCCTCTTGGATGAGCAGGGCAACCTTAAAGTCTCCGACTTTGGACTCAGCGCGGTGAAGGAAGACCAGATAGGGGTGGATGGGTTGCTTCATACGCTGTGTGGGACCCCTGCTTACGTGGCACCCGAGATTCTCGCGAAGAAGGGTTATGATGGGGCTAAGGTCGATGTTTGGTCTTGTGGGATTATCCTCTTTGTTCTTGTCGCTGGGTATCTTCCTTTCAATGATCCGAATCTAATGGTAATGTATAAGAAGATTTACAAAGGAGAATTTCGGTGTCCAAGGTGGTTTCCGATGGAGTTAAGGAGGTTTCTGACGAGGTTGTTGGATACGAATCCTGATACGAGGATAACCGTTGATGAGATCATGAGGGATCCGTGGTTTAAGAAAGGGTATAAGGAGGTAAAGTTTGGGGATTTGGGTTTGGAGTGGAAGAGTGAGGGTGAGGGTGAGGGTGTGAAGGATTTGAATGCTTTTGATATAATTTCGTTTTCTACGGGATTGAATCTTTCTGGGTTGTTTGATCATTCGTCTTGTGAGGTGGAGGAGAGGGAGAGGTTTTTGCTCAAGGAGTCGCCGGAGAAGGTGGTGGAGACGCTGGTGGCGGCGGCGGAGAAGGAGGGGATTGTGGTGAGGATGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTGGGGGTAATTTCGCTGCTTTGGTGGAGGTTTACCGGTTACCGGGTGAACTTGTTGTGGTGGAGGTTAGAAGAAGGGACGGGGATGGTGGGGTTTTTAGGGATGTGTGGAGGAATAAGCTGAGGCCGTGTTTGTGTGCTGCGAGTAGCAGTACGACGTCGGATCGGGATGGAACAACTTTGGTGCAGCCGGTGGCCGGTGAATCATGA 1344 0.5186 MVSAEKPMPETEHAAAENNTNTALFGKYEVGRLLGCGAFAKVYHARNTETGHSVAVKVISKKKLNSSGLTSNVKREISIMSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFARIAKGRFSEDLARRCFQQLISAVGYCHARGVFHRDLKPENLLLDEQGNLKVSDFGLSAVKEDQIGVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGIILFVLVAGYLPFNDPNLMVMYKKIYKGEFRCPRWFPMELRRFLTRLLDTNPDTRITVDEIMRDPWFKKGYKEVKFGDLGLEWKSEGEGEGVKDLNAFDIISFSTGLNLSGLFDHSSCEVEERERFLLKESPEKVVETLVAAAEKEGIVVRMRKECGVELEGCGGNFAALVEVYRLPGELVVVEVRRRDGDGGVFRDVWRNKLRPCLCAASSSTTSDRDGTTLVQPVAGES* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1997 447 CDD CIPK_C 312 424 - -
Gso2g1997 447 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Gso2g1997 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 437 - -
Gso2g1997 447 SUPERFAMILY Protein kinase-like (PK-like) 25 290 IPR011009 -
Gso2g1997 447 Gene3D Kinase associated domain 1, KA1 307 426 - -
Gso2g1997 447 PANTHER - 8 437 - -
Gso2g1997 447 Gene3D Transferase(Phosphotransferase) domain 1 18 306 - -
Gso2g1997 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Gso2g1997 447 Pfam NAF domain 310 367 IPR004041 GO:0007165
Gso2g1997 447 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Gso2g1997 447 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1997 447 ProSiteProfiles Protein kinase domain profile. 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1997 447 SMART serkin_6 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1997 Gso-Chr2 44400635 44402502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1997 8 432 CBL-interacting serine-threonine protein kinases AT2G30360 64.055 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso2g1997 Pkinase 2.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1997 - K12761 gmx:100813555 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1715 14 49271918 49273924 Gso2g1997 2 44400635 44402502 GST
Gso18g0480 18 4834157 4836900 Gso2g1997 2 44400635 44402502 PCT
Gso2g1997 2 44400635 44402502 Gso18g0480 18 4834157 4836900 PCT