Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1993 ATGTTTGGACATCCAGAGACAGATAGATTAGATGAGATAATTACAAAGGTGAGAGCAGAGGGAGAAGCATCTTGTCAAATGGGAAGGAAGCATTTCTATGGTCCAACTCCAGGGACAACCTTAAACACAGTAACCCCTTGTGCAGCATGCAAACTTTTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAGAAGTTTGCTGCAGTCCACAAAGTGTTTGGTGCAAGCAATGTTTCCAAGATGCTAATGGAGGTACCAGAAGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTATGAAGCTAACTTGAGGATAAGAGATCCAGTGTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAAAGATTACAAGTAGAACTAAATGCAACAAGGGCAGAGATACTAAAATACAAATATAGAGAGGCTGCATGTATCATTTCTTCTCATCATCATGTTGCTTTGGTTTCTTCTGCAGATGCAATATCAATAGCAGCAATTCCTGCAGACTCATCACAAGGTCTTTCTCAACCTCAAATTCAACCTCATCCTCCTCCTCCTCCACCAAAACCATTGCCTTCTCCTCCTCCACCAAAACCATTACCTTCTCCTTCTATTCTCCTTTCATCCTTGTCTTCATCTTCAGCTTCTTCTGTGTACACTCCTCCTAAAAGCACAATGAGCCTTGGATCCATTTCCACCACTGAAAATGTCCCATACTTTGTTTAA 762 0.4213 MFGHPETDRLDEIITKVRAEGEASCQMGRKHFYGPTPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRIRDPVYGCMGAISALQQQVQRLQVELNATRAEILKYKYREAACIISSHHHVALVSSADAISIAAIPADSSQGLSQPQIQPHPPPPPPKPLPSPPPPKPLPSPSILLSSLSSSSASSVYTPPKSTMSLGSISTTENVPYFV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1993 253 Pfam Lateral organ boundaries (LOB) domain 46 143 IPR004883 -
Gso2g1993 253 PANTHER LOB DOMAIN PROTEIN 29 252 - -
Gso2g1993 253 MobiDBLite consensus disorder prediction 183 253 - -
Gso2g1993 253 MobiDBLite consensus disorder prediction 190 215 - -
Gso2g1993 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 252 - -
Gso2g1993 253 MobiDBLite consensus disorder prediction 216 253 - -
Gso2g1993 253 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
Gso2g1993 253 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1993 Gso-Chr2 44341666 44343133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1993 27 159 AS2 family AT2G30340 79.104 6.17e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso2g1993 LOB 8.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1993 - - gmx:100778248 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1709 14 49218422 49221262 Gso2g1993 2 44341666 44343133 GST