Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1990 ATGGCACTTTCTTCTTCATCATCTTCAACATCCATATTTGCTTTAGCTTTGTTCACTCTTTTGCTTATAGGAAGTTCTTCAGCTCAACTCTCTGAGAACTTCTATGATAGTAAATGTCCCAAGGTTTTCTATGCCGTAAAATCCGTTCTTCAATCTGCTTTGGCTAAAGAACCTCGCCAGGGAGCATCTATCGTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCAGTACTACTTGATGGCCCTTCCTCAGAGAAGACTGCACCTCCCAACAATAACTCTTTGAGAGGTTATGAAGTCATTGATGCCATCAAGTCTAAGGTCGAGACAGTATGCCCCGGAGTGGTGTCATGTGCTGATATTGTAACCATTGCTGCTCGTGACTCTGTTGCAATCCTTGGAGGGCCATATTGGAAGGTTAAACTTGGTAGAAGGGATTCCACGACTGGATTTTTCAACCTTGCTAGCAGTGGTGTGCTCCCAGGACCTGGTTCTTCCCTCAGCGACCTTATCAAAAGATTTGATGATCAAGGGCTCTCTACCAAGGACATGGTTGCATTATCTGGAGCACACACAATTGGAAAGGCAAGATGTGCAAGTTATAGAGGTCGCATATACAATGAAAACAACATTGACAGTTTATTTGCCAAGGCAAGGCAAAAGAACTGTCCAAAAGGTAGCAATGGAACACCAAAGGACAACAATGTAGCACCACTAGACTTCAAAACTCCTAACCATTTTGACAACGAGTACTTCAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAATGGAGGATCCACAGATTCACTAGTGAGAGCTTACAGCAACAATCAAAAGGCCTTTGAGGCTGACTTTGTCACTGCAATGATTAAGATGGGAAACATCAAACCCTTAACTGGGTCAAATGGGCAGATAAGGAAGCAATGTAGGAGGCCCAATTAG 975 0.4328 MALSSSSSSTSIFALALFTLLLIGSSSAQLSENFYDSKCPKVFYAVKSVLQSALAKEPRQGASIVRLFFHDCFVNGCDGSVLLDGPSSEKTAPPNNNSLRGYEVIDAIKSKVETVCPGVVSCADIVTIAARDSVAILGGPYWKVKLGRRDSTTGFFNLASSGVLPGPGSSLSDLIKRFDDQGLSTKDMVALSGAHTIGKARCASYRGRIYNENNIDSLFAKARQKNCPKGSNGTPKDNNVAPLDFKTPNHFDNEYFKNLINKKGLLHSDQELFNGGSTDSLVRAYSNNQKAFEADFVTAMIKMGNIKPLTGSNGQIRKQCRRPN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1990 324 PANTHER PEROXIDASE 72-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gso2g1990 324 PANTHER PEROXIDASE 3 323 - -
Gso2g1990 324 Gene3D Peroxidase, domain 2 165 303 - -
Gso2g1990 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601|GO:0042744
Gso2g1990 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gso2g1990 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 Gene3D - 33 324 - -
Gso2g1990 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1990 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1990 Gso-Chr2 44309729 44314148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1990 1 324 Peroxidase AT5G58400 59.021 2.87e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1990 K00430 - gmx:100812478 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1704 14 49189772 49194957 Gso2g1990 2 44309729 44314148 GST
Gso18g0487 18 4890651 4894605 Gso2g1990 2 44309729 44314148 PCT
Gso2g1990 2 44309729 44314148 Gso18g0487 18 4890651 4894605 PCT