Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1988 ATGGCTTCTTTTCATATCCTTGTGCTCGTGGTTGCTATGGTCACATTGATGATCCCTACGAATGCAAACCTCTCTCCCCATTTCTATGATAAAGTATGCCCTCAGGCATTGCCAGTCATAAAGTCAGTGGTTCAACGAGCAATTATCCGTGAGGGACGCATCGGAGCATCTCTTCTGCGCTTGCATTTCCATGATTGTTTCGTAAATGGGTGTGATGGATCAATATTGCTAGATGACACCCGAAACTTCACTGGCGAGAAGACAGCATTGCCAAATCTTAATTCAGTCAGAGGATTTTCGGTGGTTGATGAAATCAAAGAAGCGGTGGACAAAGCCTGCAAACGCCCTGTGGTCTCATGTGCAGATATCTTGGCCATTGCAGCTCGTGATTCTGTAGCCATATATGGGGGTCCACACTATTGGTACCAAGTATTGTTGGGCAGAAGAGATGCAAGAACTGCAAGCAAAGCTGCTGCAAATTCCAATCTTCCTCCTCCATCTTTCAGCTTCTCACAACTTGTTTCCAACTTCAAATCCCACGGCTTAAACGTGAGGGACCTTGTGGCCCTCTCTGGAGGCCACACCCTAGGGTTTGCAAGGTGCAGCACCTTCAGAAACAGAATCTACAACGCAAGCAACAACAACATAATAGACCCAAAATTTGCAGCATCTTCGAGGAAGACATGTCCGCGAAGCGGAGGAGACAACAACTTGCATCCATTTGATGCTACTCCTGCGAGAGTTGACACTGCATATTACACGAATTTGCTGCACAAAAAGGGTCTTCTCCATTCTGATCAAGAGCTGTTCAAGGGAAAAGGCACAGAAAGTGACAAATTGGTGCAACTGTATAGTAGAAGCCCTTTGGTTTTTGCTAGAGATTTTAAAGCTTCCATGATCAAGATGGGGAACATGAAGCCTCTCACTGGGAAGAAGGGAGAGATCAGATGCAATTGCAGAAGGGTCAATTAA 972 0.4568 MASFHILVLVVAMVTLMIPTNANLSPHFYDKVCPQALPVIKSVVQRAIIREGRIGASLLRLHFHDCFVNGCDGSILLDDTRNFTGEKTALPNLNSVRGFSVVDEIKEAVDKACKRPVVSCADILAIAARDSVAIYGGPHYWYQVLLGRRDARTASKAAANSNLPPPSFSFSQLVSNFKSHGLNVRDLVALSGGHTLGFARCSTFRNRIYNASNNNIIDPKFAASSRKTCPRSGGDNNLHPFDATPARVDTAYYTNLLHKKGLLHSDQELFKGKGTESDKLVQLYSRSPLVFARDFKASMIKMGNMKPLTGKKGEIRCNCRRVN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1988 323 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Gso2g1988 323 Gene3D Peroxidase, domain 2 164 303 - -
Gso2g1988 323 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Gso2g1988 323 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PANTHER PEROXIDASE 72-RELATED 4 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PANTHER CATIONIC PEROXIDASE 4 322 - -
Gso2g1988 323 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 Gene3D - 28 323 - -
Gso2g1988 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gso2g1988 323 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso2g1988 323 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1988 Gso-Chr2 44289060 44292462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1988 22 323 Peroxidase AT5G05340 57.377 1.13e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1988 K00430 - gmx:100811396 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1702 14 49172789 49176673 Gso2g1988 2 44289060 44292462 GST
Gso18g0488 18 4909870 4913939 Gso2g1988 2 44289060 44292462 PCT
Gso2g1988 2 44289060 44292462 Gso18g0488 18 4909870 4913939 PCT