Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1987 ATGGGTTCTCATCTCCAATTATCTTTCCTTGTGCTTGTTATGGTCACTTTGGCAACATTTATGATCCCTACCTTTGCTCAGCTCACTCCTAATTATTATGACAAAGTTTGCCCTCAGGCGTTGCCAATCATAAAGTCAATTGTTAAGCAGGCAATTATTCGTGAAAAACGCATTGGAGCATCCTTGCTGCGTTTGCATTTTCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTGCTGCTAGATGACACACCTTCCTTCTTGGGGGAGAAGACTGCACTTCCAAATCTTAATTCAATTAGAGGATTTGAGGTGGTTGATGAAATCAAAGTAGCAGTTGACAAAGCTTGCAATCGTCCTGTAGTATCATGTGCAGATATCTTAGCTGTTGCAGCTCGTGACTCTGTAGCTATATTGGGGGGTGCACAATATTGGTACCAAGTGTTACTAGGCAGAAGAGATGCAATATATGCAAGCAAGGATGCGGCAAATGCCAATCTCCCTCCCCCATTCTTCAACTTCCCACAGCTTCTTGCTAGTTTCCAATCTCATGGCCTTGACCTCAAGGATCTAGTGGTCCTCTCTGGTGGCCACACAATTGGACTAGCAAAGTGCATTACCTTCAGGGACAGGATCTTCAATGAAACCCACATAGACCCCAACTTCGCAGCCACTTTGCGCGATTCATGCCCTCGAAGAAGCGGTGATGGAGACACTAACCTAACACCATTGGATGCCTCCTCTCCTTCACAATTTGACAACACATACTACAAGGCTTTGTTGCACAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTATTCAAGGGTGGTGATGATGGTGGTGAAAGTGATAGATTGGTGCAGCTATACAGCTATGACCCTTATGCTTTTGCTAGAGATTTTGGTGTCTCCATGATTAAGATGGGTAACTTGAAGCCTCTTACTGGGTATGAGGGAGAGATCAGGTACAATTGCAGAAAAGTCAACTACTAG 993 0.4431 MGSHLQLSFLVLVMVTLATFMIPTFAQLTPNYYDKVCPQALPIIKSIVKQAIIREKRIGASLLRLHFHDCFVNGCDGSVLLDDTPSFLGEKTALPNLNSIRGFEVVDEIKVAVDKACNRPVVSCADILAVAARDSVAILGGAQYWYQVLLGRRDAIYASKDAANANLPPPFFNFPQLLASFQSHGLDLKDLVVLSGGHTIGLAKCITFRDRIFNETHIDPNFAATLRDSCPRRSGDGDTNLTPLDASSPSQFDNTYYKALLHKKGLLHSDQELFKGGDDGGESDRLVQLYSYDPYAFARDFGVSMIKMGNLKPLTGYEGEIRYNCRKVNY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1987 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Gso2g1987 330 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PANTHER CATIONIC PEROXIDASE 1 329 - -
Gso2g1987 330 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Gso2g1987 330 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 Pfam Peroxidase 45 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gso2g1987 330 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso2g1987 330 Gene3D Peroxidase, domain 2 168 308 - -
Gso2g1987 330 Gene3D - 31 329 - -
Gso2g1987 330 PANTHER PEROXIDASE 72-RELATED 1 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1987 Gso-Chr2 44278287 44281419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1987 26 329 Peroxidase AT5G05340 55.592 9.18e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1987 K00430 - gmx:100810852 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0489 18 4917129 4919758 Gso2g1987 2 44278287 44281419 PCT
Gso2g1987 2 44278287 44281419 Gso18g0489 18 4917129 4919758 PCT