Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1975 ATGGCATCTTCTTCTGGTAGTTTAGACACCTCTGCAAGTGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCTTTCATGACCACTTCTTTCTCTGACCTTCTTGCTTCTCCCACAGACAACAACAAACCACCACATGGTGGTGGTGGTGGTTTGTCTGAGAGAACTGGCTCTGGTGTCCCCAAATTCAAGTCCACACCACCACCTTCTCTGCCTCTCTCTCCTCCTCCCATTTCTCCTTCTTCCTACTTTTCTATTCCTCCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCACCTGTTCTCCTTAACTCTTCCAACATTCTGCCATCTCCAACAACTGGAGCATTTGTTGCTCGGAGCTTCAATTGGAAGAGCAGTTCCGGGGGGAACCAGCGAATTGTCAAAGAAGAAGACAAAGGCTTCTCAAATTTCTCCTTTCAAACCCAACAAGGACCTCCTGCTTCATCCACAGCAACATATCAGTCTTCAAATGTCACAGTTCAAACACAACAGCCATGGAGTTATCAGGAGACCACAAAGCAGGATAATTTTTCTTCAGGAAAGAGCATGATGAAAACTGAAAAATCTTCATCCATGCAAAGTTTTTCCCCTGAGATTGCTAGTGTCCAAAATAATCATAGCAATGGGTTTCAATCGGATTATGGCAATTACCCCCCACAATCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAACAAGTGAAGGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAACTGCCCTACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATCGTTTATAAGGGTACTCATAACCATCCTAAGCCTCAAAATACTAGGAGAAACTCATCAAATTCCTCTTCTCATGCAATCCCTCATTCAAATCCCATCAGCACTGAAATCCCAGATCAATCCTATGCCACACATGGAAGTGGACAAATGGATTCAGCTGCCACCCCAGAAAACTCATCAATATCAATTGGAGATGATGATTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGAGGGGATGAATATGATGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATGTCTGCCCCTGGAAGTAGAACAGTAAGAGAACCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTATAGATGGAGAAAATACGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCAGGATGTCCAGTGAGGAAGCATGTGGAAAGAGCTTCACATGACCTAAGGGCTGTGATCACAACCTATGAGGGGAAGCACAACCATGATGTTCCTGCAGCTCGTGGCAGTGGCAGCCATTCTGTTAACAGACCAATGCCAAACAATGCTTCAAACCCTACCAACACTGCAGCCACTGCCATAAGTCCCTTGCAAGTGATCCAACACAGTGACAATTCCCATCAGAACCAAAGATCTCAAGCACCACCAGAGGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGATTCTCAGGGTTTGGGAATCCAATGCAATCTTACATGAATCAGCAGCAACAACAACTATCTGACAATGTTTTCTCTTCCAGAGCCAAGGAGGAGCCTAGAGATGACATGTTCCTTGAGTCTCTACTATGCTGA 1743 0.4441 MASSSGSLDTSASANSFTNFTFSTHPFMTTSFSDLLASPTDNNKPPHGGGGGLSERTGSGVPKFKSTPPPSLPLSPPPISPSSYFSIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVARSFNWKSSSGGNQRIVKEEDKGFSNFSFQTQQGPPASSTATYQSSNVTVQTQQPWSYQETTKQDNFSSGKSMMKTEKSSSMQSFSPEIASVQNNHSNGFQSDYGNYPPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSNSSSHAIPHSNPISTEIPDQSYATHGSGQMDSAATPENSSISIGDDDFEQSSQKCKSGGDEYDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNASNPTNTAATAISPLQVIQHSDNSHQNQRSQAPPEGQSPFTLEMLQSPGSFGFSGFGNPMQSYMNQQQQQLSDNVFSSRAKEEPRDDMFLESLLC* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1975 580 MobiDBLite consensus disorder prediction 505 525 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 286 391 - -
Gso2g1975 580 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 556 IPR044810 GO:0003700
Gso2g1975 580 MobiDBLite consensus disorder prediction 172 240 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 66 84 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 33 87 - -
Gso2g1975 580 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 MobiDBLite consensus disorder prediction 544 562 - -
Gso2g1975 580 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 43 556 - -
Gso2g1975 580 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 Gene3D WRKY domain 224 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 Gene3D WRKY domain 395 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 MobiDBLite consensus disorder prediction 291 351 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 172 236 - -
Gso2g1975 580 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g1975 580 MobiDBLite consensus disorder prediction 544 580 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 352 380 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 462 492 - -
Gso2g1975 580 MobiDBLite consensus disorder prediction 477 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1975 Gso-Chr2 44147417 44150846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1975 234 579 WRKY Transcription Factor Family AT2G38470 55.989 1.92e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g1975 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1975 K13424 - gmx:100127385 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1688 14 48982931 48986328 Gso2g1975 2 44147417 44150846 GST
Gso18g0501 18 5037758 5041353 Gso2g1975 2 44147417 44150846 PCT
Gso2g1975 2 44147417 44150846 Gso18g0501 18 5037758 5041353 PCT