Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1971 ATGCCCGTCGAAATTCATAGTTGGCTGCAGCAGCCAAAGGTACGAAAATTTTTGTGTTTTGTTTCATCTATTGTTGGGCTGATTTGTTATGCTCTCAGTTCCTCTTTCAATAAATTATTTGGAAAATGGACCTGGTGGAATATACTACTTTATATTGTTTTTTGTCTCTGCATCATCTTCTACCTTGTCTATATGTTGGCAAACACATGGGAGCCCTCTTTGACCTCTTCCCGGTTGAAAGCTCATTCAGCCTTTTTGGTTTTGCTTATGACTTCTGTATACTCCTTTTTCGTTGATAAAGAATTGCAAGGGAAACCAGATGTATATAGCCTAGTTTCGTCTGCTGCATTTGCTATCGCGTCTTTGGGATTGTCAACTCTGACTACCTTAGGATTCGAGGTTGATCTCTTGTATTTTTTCAGCGGTGTTCTAATAGTACAACTCATGAAAATTAATTTATGGTTGGTCATTGTTGGAGGGGGTTTCAGTTATTTCCTCATCATTCTTCGGTCTACTTTAGAAAATGAGTATAATCAAATCCAAGACATTGAAATTGGTCTGCATCGACCATCACAAGGAACTAACGTTTCTCAAGTGTCTTCTTCACCCCAAGCTATTGGTAATGCTCATCCACAAGCTGATGCTAGTCAGGTCACCCAAGTTGCTTTAAGTTCACAACAAGGCAATAGGCATAGAGGTCTTATCAGGGCCCGGTATATGAGTCATATAGAGGAGCTTAAGAAGGAGAATGGGAAGCTCATCGACACAATTTCCAAGCATGTCGGCGAATACCTTATGGCTAATGTTGTGAACGAAGACGGTATTTCAGTGCCGGAAATGCAAGCAGATGACAACTTGGTGGCGGATGTGTTGCCACAAGGAATCATCAACAACCTTCGTGAAACCGGGAGGCTGATGTTACAGAATGAGTGCTGCAATGTGTACAGCAGGGTCCGGAGGGAGTTTCTGAAAGAGTGCCTATCAAAATTTGGGTTGCAAGTTGAAGAGCTAAACGTGGAGGACATTGACAAGATGGAGAAGATTGAGAGTTGGATAAAAGCTTTGAACATAACCGTGAGGATACTCTTTCCCAATGAAAGGAGACTTTGCGATCTTGTCTTCTCGCCATCTTATGCTGCAGATATCTCTTTCGGGGAGGTTTGCAAGGAACTGAATATTAGTCTACTGAGATTCGCGAATACCTTAGCAACTGAGAATCATTCGCCGTTTCATTTGTGCCATCTCATCCCCAAAGTGTTCAAGACTTTGAGTGACCTGATTCCAAATTTCAATTCACTGTTTTATGGTCAGTTGTTCAGTGAATCACTCAGAAATGACGCGGTCCTTGTTGGGAAGAGATTGGGGATTTTTGTGGAGTTGGAGAGTCTTATTCACCGTGAGATGCCAAAGGAGACTGTTCCAGACGGCGGAATTCATCCAACTACTCACAAAGTAATGGACTACCTCAGAGATGTTTTCATAGATAATCAGAGTTTTTCAATTAGAACGGGAGTATCTTCATTTTCTGACCAGGTAGCCAGGATAATACAAGTGTTAGACAGCAGTTTGGAAGCCAAGTCCAAAAACTATACAGACCCTGCATTGGGCCATGTTTTCATGATAAATAATCTGATGCTTTTACAATATGAGAAATATATATATAGAGTAGTCATTTTTGGTGAAGATTGGTACAAATCAAAGATCAACCAAAACATTGAACTCTATCAAAGAAGCTCATTGGATAAGATATTGGACTTTTTAAATCTAGACAGCAATGAGTTGTTGCTAGCAGAGTCGATGAAAAAGAAGCTCAAATTGTTCAACCAGCACTTCAACGAGATATGCAAAGCTCAGTCTGAATGGCTTATCTTTGATGAGCAGCTAAAGGAACAGATGATAAAATCCATAGAAAACAAATTGTTGCCGGCGTATGGAACCTTTCTTGGAAGGATTCATGATGTTCTTGGTAAGGATGCTTATGACTTCATTAGGTATGGAATACAGAACATTCAAGACCTACTGAGCGGTTTGTTTCTTGTAATCCAACATGAAGTTATCATCCATGAGTATAATCATATACAAAAAAGGAAGGCCTGTAAACCACTTATGCTGCCAACATCATATTCAAACCGCTTCTCCCTCGATGGTTGTCTCCACTGGGGAAGGCGTGTGCGGGAATCTAGCGCTGGAGATATGGGACACACGGCTACAACAGTGAAAGCCCGCGGTGGTGGCAGAGTGAGGGCCCACCACGGATCGACACCAGTGGAGATGCAGAGGACGCAGGAGTGGTTGACGGTGGCGCGAAGAGAAATGTCCGAAAACGGAGAAGAGAAATTACTCGCTGTGGCGCGGCACATAGCGAAAACGCTGGGCCACAACAACACCATGTCTGATGACATATTCCAAATACTATCGAACTTCGACGGAAGATTCTCGAGAGAGAATCTTTCTGAGAAAGGCGCAGATGCGGATCCCAGAGGCTGCGCCGCACTGGATCATTCCCTCAAAACCCTAGACCGCCGGATCTCTCTCTACGTCTCCTCCGACCGCCCTATCTGGTCCGACGCCGCCGACTCCGCCGCCTTCCTCGACGCCGTTGACAAGCTCGTCGCCGTCGTCGCCGAGTGGAACCACCTCGCCTCCGACAAAGCCGTCGCCGCCTGCCTCGTCCGCGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGGGGACGAGTTCCGCTCGCTCATGGAGCGCGGCGGCGAGTCCTTCGGCCTCACTCGGAGCTACTGGAACGGCGAGTCAACGGAGAATTTACCGTTCGAGTCAGACGAAGACGAAGAAGAAGAGGAAGCGAGAAACGGAGGAGGAGACAAGGAGGAACAGATTCCGGTGGCGCTGCCGGTCACCGGCTTCGATATCGTCATCGACGCGCTGCCGTCGGGGACGATCAACGACCTCCACGAGATTGCGAAGCGAATGGTGGCAGGAGGTTTCGGGAAGGAGTGCTCTCACGTGTACAGCAGCTGCCGGAGGGAGTTTCTGGAAGAAAGCGTGTCGAGATTAGGGTTACAGAAGCTCAGCATCGAGGAGGTTCACAAGATGACGTGGCAGGATCTCGAAGGCGAGATTGAGAAGTGGATTAAGGCCTCCAACGTCGCTCTAAAGATCCTCTTCCCTAGCGAGCGCCGTCTCTGCGACCGCGTCTTCTTCGGATTCGCCTCCGCCTCGGATTTCTCCTTCATGGAGGTCTGCCGCGGATCCGCGATTCAGCTGCTGAATTTCGCGGACGCCGTCGCAATCGGGAGCCGGTCGCCGGAACGGCTGTTCAGAATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCGGAGTTTGAGGCTCTGTTTTCGGACCAGTTCAGTGTGTCGCTCAGGAATGAAGCGATTACTATTTGGAGGAGGTTGGGGGAAGCTATTAGGGGCATTTTTATGGAGCTGGAGAATTTGATTCGCCGGGATCCAGCGAAGATGGCGGTTCCCGGTGGCGGTCTCCATCCGATCACTCGCTACGTGATGAACTACCTTCGTGCTGCGTGCCGGTCACGCCAGAGCTTGGAGCAAGTATTTGAAGACTATGGCTTGAAAGAGTATACAAAGCTTGAGGATAGGGTTCCTTCCTCTTCTTCTCTGTCAGTGCAAATGGATTGGATTATGGAACTGTTAGAAAGCAATTTGGAAGCAAAGTCCAGGATTTACAAGGACCCTGCTTTGCGCTATGTTTTCTTGATGAATAATGGGAGGTACATTGTTCAGAAGACCAAAGATAGTGAATTGGGAACCCTTTTGGGAGATGATTGGATCAGAAAACACGCTGCAAAAGTTAGGCAATTCCATGTGCACTATCAAAGATGCTCGTGGACTAAGGTATTAGGGATTTTGAAGCTTGATAGTAATGGCTCATCATTGCCCCCTAATGGCTTGGCAAAGTCAATGAAGGAGACGCTCAAGTTGTTTAACACAGTTTTTGAGGAGACTTGCAGGGAGCATTCTTCCTGGTTTGTCTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCCCTTGAAAAAATCCTGCTTCCTGCGTATGGGAACTTTGTTGCGAGGTTTGAGAGTGTTGCGGAGCTTGGAAAGAATGCTGACAAGTATATTAAGTATGGAACGGAGGAAATTCAAGCAACACTCAATGGTTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAAGTGA 4236 0.4679 MPVEIHSWLQQPKVRKFLCFVSSIVGLICYALSSSFNKLFGKWTWWNILLYIVFCLCIIFYLVYMLANTWEPSLTSSRLKAHSAFLVLLMTSVYSFFVDKELQGKPDVYSLVSSAAFAIASLGLSTLTTLGFEVDLLYFFSGVLIVQLMKINLWLVIVGGGFSYFLIILRSTLENEYNQIQDIEIGLHRPSQGTNVSQVSSSPQAIGNAHPQADASQVTQVALSSQQGNRHRGLIRARYMSHIEELKKENGKLIDTISKHVGEYLMANVVNEDGISVPEMQADDNLVADVLPQGIINNLRETGRLMLQNECCNVYSRVRREFLKECLSKFGLQVEELNVEDIDKMEKIESWIKALNITVRILFPNERRLCDLVFSPSYAADISFGEVCKELNISLLRFANTLATENHSPFHLCHLIPKVFKTLSDLIPNFNSLFYGQLFSESLRNDAVLVGKRLGIFVELESLIHREMPKETVPDGGIHPTTHKVMDYLRDVFIDNQSFSIRTGVSSFSDQVARIIQVLDSSLEAKSKNYTDPALGHVFMINNLMLLQYEKYIYRVVIFGEDWYKSKINQNIELYQRSSLDKILDFLNLDSNELLLAESMKKKLKLFNQHFNEICKAQSEWLIFDEQLKEQMIKSIENKLLPAYGTFLGRIHDVLGKDAYDFIRYGIQNIQDLLSGLFLVIQHEVIIHEYNHIQKRKACKPLMLPTSYSNRFSLDGCLHWGRRVRESSAGDMGHTATTVKARGGGRVRAHHGSTPVEMQRTQEWLTVARREMSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGADADPRGCAALDHSLKTLDRRISLYVSSDRPIWSDAADSAAFLDAVDKLVAVVAEWNHLASDKAVAACLVRAEDMLQHAMFRLGDEFRSLMERGGESFGLTRSYWNGESTENLPFESDEDEEEEEARNGGGDKEEQIPVALPVTGFDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEEVHKMTWQDLEGEIEKWIKASNVALKILFPSERRLCDRVFFGFASASDFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQFSVSLRNEAITIWRRLGEAIRGIFMELENLIRRDPAKMAVPGGGLHPITRYVMNYLRAACRSRQSLEQVFEDYGLKEYTKLEDRVPSSSSLSVQMDWIMELLESNLEAKSRIYKDPALRYVFLMNNGRYIVQKTKDSELGTLLGDDWIRKHAAKVRQFHVHYQRCSWTKVLGILKLDSNGSSLPPNGLAKSMKETLKLFNTVFEETCREHSSWFVFDEQLREEIRISLEKILLPAYGNFVARFESVAELGKNADKYIKYGTEEIQATLNGLFQGSSGSTGSRK* 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1971 1411 Pfam Exo70 exocyst complex subunit 1041 1397 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso2g1971 1411 Pfam Exo70 exocyst complex subunit 350 675 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso2g1971 1411 PANTHER EXOCYST COMPLEX PROTEIN EXO70 20 678 IPR004140 GO:0000145|GO:0006887
Gso2g1971 1411 PANTHER EXOCYST COMPLEX PROTEIN EXO70 801 1401 IPR004140 GO:0000145|GO:0006887
Gso2g1971 1411 MobiDBLite consensus disorder prediction 934 949 - -
Gso2g1971 1411 SUPERFAMILY Cullin repeat-like 269 678 IPR016159 -
Gso2g1971 1411 MobiDBLite consensus disorder prediction 931 955 - -
Gso2g1971 1411 Gene3D Exocyst complex component Exo70 853 1410 - -
Gso2g1971 1411 Gene3D Exocyst complex component Exo70 215 683 - -
Gso2g1971 1411 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 801 1401 - -
Gso2g1971 1411 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 20 678 - -
Gso2g1971 1411 SUPERFAMILY Cullin repeat-like 854 1400 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1971 Gso-Chr2 44069822 44083709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1971 271 678 EXO70 exocyst subunit family AT5G58430 43.018 3.14e-92 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1971 K07195 - gsj:114376661 2746.07