Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1963 ATGGGATGCACTTCGCTGCTTAGAAGCCCCAAGAAAGAAGAACAAGAAGTGCCCGATGCCAATTCTAACCAACCTTACACCTATGAAGATTTCAATATTTTGGACGAACTCGAAGGGGTCTTGAGCACCAAGGAAGAACAAGATTCTTCGTTGCCGCAACAAAAATCTTCTAGTAGTGAATTCCATTGGGATTTCATGGAATGGGAGGAGTTTCAACCCCCCAATATTGAAGAGGAAGGAGAAGATGAAAATGAAGGGAAAGAGAACAGGAGGAGCAAATGCCTCTTTGATGAGGAGGAGCAAGAGATGAAGATTGAAAACAATAATAATATTGTTGGGTTTTGGGAAATGGATGATGAGAAGATGGTGGCTTTGAATTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGACCGAGGCTCTCTATGGGCTGATGATTGTTCTCTTTCATTCGCCACCAATAATGCCTACTATATGGGAGAAGTGCCGGTATTGGAAGAAGAGAGAGCAAGAAGAGAAGCATGTGTTCTTAGGTACAAAGAGAAGCGCCAGAACAGGTTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACTCTGA 654 0.422 MGCTSLLRSPKKEEQEVPDANSNQPYTYEDFNILDELEGVLSTKEEQDSSLPQQKSSSSEFHWDFMEWEEFQPPNIEEEGEDENEGKENRRSKCLFDEEEQEMKIENNNNIVGFWEMDDEKMVALNLNLNYQEVLDAWSDRGSLWADDCSLSFATNNAYYMGEVPVLEEERARREACVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1963 217 MobiDBLite consensus disorder prediction 1 59 - -
Gso2g1963 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 216 - -
Gso2g1963 217 PANTHER CCT MOTIF FAMILY PROTEIN 4 216 - -
Gso2g1963 217 MobiDBLite consensus disorder prediction 44 59 - -
Gso2g1963 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Gso2g1963 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1963 Gso-Chr2 43988376 43989935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1963 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 45.763 2.21e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso2g1963 CCT 1.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1963 - - gmx:100803772 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1668 14 48800706 48802405 Gso2g1963 2 43988376 43989935 GST