Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1960 ATGGAGAAGGTGGTATGTGTGACCGGCGGCAGCGGCTGCATTGGTTCATGGCTCGTCCATCTCCTCTTGGATCGCGGCTACACCGTTCACGCCACCGTCCAAAACCTCAACGATGAAGCCGAGACGAAGCATCTTCAATCCCTCGACGGAGCGTCCACGCGCCTCCGCCTCTTCCAGATGGATCTCCTCCGCCACGACACCGTCCTCGCCGCCGTGCGTGGCTGCGCCGGCGTCTTCCACCTCGCCTCTCCCTGCATTGTCGACCAAGTCCACGACCCCCAGAAGGAGCTTCTGGACCCGGCGATTAAGGGAACCATGAACGTGCTCACGGCGGCGAAGGAAGCAGGGGTGCGGCGCGTGGTGCTCACGTCCTCCATCTCCGCGGTTACGCCGAGCCCCAATTGGCCCGGCGATGTTGCCAAGACGGAGGAGTGCTGGACCGACGTTGAATATTGCAAGCAAAAGGGGTTGTGGTATCCATTGTCGAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCTAAAGAGAATGATTTGGATGTTGTGGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTCCACCAAGGCTTAATGCGAGCATGGTCATGCTCGTGCGCCTTCTACAAGGCTGTGCCGAAACATATGAGGACTTTTTTATGGGATCGGTCCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAATCAGCGGCTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCACTATGGTGACTTTGTGGCAAAAGTTGCTGAACTCTATCCAGAGTATAATGTGCCTAAGATGCAACGAGATACCCAGCCGGGATTATTGAGAACAAAGGATGGAGCAAAGAAACTGATGGATTTGGGTTTGCAATTCATTCCAATGGAGAAGATTATTAAGGATGCTGTAGAGGATTTGAAGAGCAAAGGGTTCCTTTCATAA 963 0.5265 MEKVVCVTGGSGCIGSWLVHLLLDRGYTVHATVQNLNDEAETKHLQSLDGASTRLRLFQMDLLRHDTVLAAVRGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLTAAKEAGVRRVVLTSSISAVTPSPNWPGDVAKTEECWTDVEYCKQKGLWYPLSKTLAEKAAWDFAKENDLDVVVVNPGTVMGPVIPPRLNASMVMLVRLLQGCAETYEDFFMGSVHFKDVALAHILVYENKSAAGRHLCVEAISHYGDFVAKVAELYPEYNVPKMQRDTQPGLLRTKDGAKKLMDLGLQFIPMEKIIKDAVEDLKSKGFLS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1960 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Gso2g1960 320 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
Gso2g1960 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Gso2g1960 320 CDD FR_SDR_e 5 297 - -
Gso2g1960 320 Gene3D - 1 320 - -
Gso2g1960 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1960 Gso-Chr2 43968833 43971228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1960 3 320 Monolignol Biosynthesis Gene Families AT5G58490 78.302 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1960 - - gmx:100803241 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1665 14 48761510 48764170 Gso2g1960 2 43968833 43971228 GST