Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1959 ATGTATGCCTACTTCGACAGAGACAATATTGCTCTGAAGGGATTGGCCAAATTTTTCAAGGAATCAAGTACGGAGGAAAGACAGCATGCTGAGATTATGATGGAATATCAGAATAAAAGAGGAGGCAGGGTTCAGCTGCAGTCAATGCTGATGCCATTTTCAAAATTTGATCACGCAGAAAAGGGTGATGCATTATATGCAACGGAACTTGCATTGTCTTTGGAATGGACAAATGAAAACAATGACGTTCAATTTGTTGACTTTCTAGAAAGCGAGTTTTTGGTTGGTCAGGTGGAAGACATTAAAAAGATCTCAGAATATGTGGCTCAGTTAAGAAGAATGGGCAGAGGACATGGTAATACTGTTTGGCACTTTGATCAGATGCTCCTTAATGGAGGATCTTCCAGTTCACCAAAGAGAAGATGCAGTGAGCAGTTTAGTGCAAGAGTTACAAACCCCGTGTATGGTTGTGTTGGAATCATATCTTACCTAGAAAGTCAAGTTTCTGAGTTACAAAAGCAGCTTGCGGTAGCTCAGGCAGAGATTCTTAGCATGCAAATGTAG 564 0.4078 MYAYFDRDNIALKGLAKFFKESSTEERQHAEIMMEYQNKRGGRVQLQSMLMPFSKFDHAEKGDALYATELALSLEWTNENNDVQFVDFLESEFLVGQVEDIKKISEYVAQLRRMGRGHGNTVWHFDQMLLNGGSSSSPKRRCSEQFSARVTNPVYGCVGIISYLESQVSELQKQLAVAQAEILSMQM* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1959 187 Coils Coil 161 187 - -
Gso2g1959 187 ProSiteProfiles Ferritin-like diiron domain profile. 1 115 IPR009040 -
Gso2g1959 187 PANTHER FERRITIN 1 133 - -
Gso2g1959 187 Pfam Ferritin-like domain 2 114 IPR008331 GO:0008199
Gso2g1959 187 SUPERFAMILY Ferritin-like 1 131 IPR009078 -
Gso2g1959 187 ProSitePatterns Ferritin iron-binding regions signature 2. 82 102 IPR014034 -
Gso2g1959 187 Pfam Lateral organ boundaries (LOB) domain 147 179 IPR004883 -
Gso2g1959 187 CDD Euk_Ferritin 1 127 - -
Gso2g1959 187 Gene3D - 1 136 IPR012347 -
Gso2g1959 187 PANTHER FERRITIN 1 133 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1959 Gso-Chr2 43949242 43964724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1959 147 187 AS2 family AT2G30130 75.610 2.06e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso2g1959 Ferritin 7.1e-13 CL0044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1959 K00522 - gmx:100781581 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1664 14 48753295 48756138 Gso2g1959 2 43949242 43964724 GST