Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1955 ATGGCCGCAGCCTTAGAGTGCTGGTCCAGCCGCACCACCACGTCCGCCGCTGCCGCCACCGACGACGACACGGTGGAGCAGGTCCTCATGCGCACCCACCACAGATCCGAGGGAACCACCACCACTTCCACCCACAACAACAAAGACAACCTTCCCTCCGCCATCCCCGTCCACAAGAAGCTCCAGAAGCTCACTCGCAACGTCTCCGAAGCTATTGCTTCTTTCAGAAACTCCCTCAACCTCGATTCTCCTCCTTCTTCCAACGCTGATGCTTCTTCTCGGAAACTCGCGTGGGGAAGCGTTGTTCGCAATCTCACTCAGCTTTACCCTGGAAGCCAGCTCCCCGAGAAACTCATGTCCAACATTCGCAAGCATTACGATTCCTTGCCCCTCAGTTATGCACAGGCGGAGTTTGATATGAAGAATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCAGAGAGTGACCAGCCAGCGATTTTAATTCAAGAGGAATGTGATGGTGAGATTCAGGGGTCTGCTTTGAGGCTCACGTTTGCTTGCAACTCTCCGATTTCGTGGCCTGCAATGTCGGGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGGGTTGTGCTTCTTGTGGTTCTACCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCCATGAAGAAGCCCAAAACCGGTGCCGTGAAGCTTCCCTTTGGGCTCTGTGGGTGCCAGGAAGAGAATTCTAAAGGAAGAGAGCTTGTGGAGATTGAAGAAGAAACCGGTGATGGTTACCGCGGAAAGGAGTTTGAGAATTCAAGCCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGAATGAGATTGAGAAATGGTTGTTGAATTCAGATAGTGTTGAGTTTGTTGAGCAGATTGGTCCGAATTCATATAGGGGAGTGTATATGGGGAAGAGGGTTGGGATTGAGAAGCTGAAGGGTTGTGATAAAGGGAATTCTTATGAGTTTGAGCTCCACAAGGATCTTCTGGAACTCATGACTTGTGGCCATAGAAACATTCTGCAGTTTTGTGGTATTTGTGTGGATGATAATCATGGATTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACTTGATGATGAAGAACAAAAAGCTTCAGACTAAGGATGTTGTGAGGATTGCTGTTGATGTTGCTGAAGGGATCAAGTTTATGAATGACCATGGTGTAGCATATAGAGACCTTAATACACGGGGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCAGAGATAATTGCAGGGGATCCAGAGAATGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCTTCATTTTCACCTGTACAAGCAGCAGTTGGCATTGCTGCATGTGGCCTTCGACCTGAAATCCCAAAAGACTGCCAACAAACTCTAAAACACATTATGACAAAGTGCTGGAACAACACCCCTTCAAAACGTCCTCACTTCTCTGAAATTTTAGCCATATTGCTGCGACCAAACAACAACAATAGATAA 1767 0.472 MAAALECWSSRTTTSAAAATDDDTVEQVLMRTHHRSEGTTTTSTHNNKDNLPSAIPVHKKLQKLTRNVSEAIASFRNSLNLDSPPSSNADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKNVFLHIKLMEQASESDQPAILIQEECDGEIQGSALRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVLPGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRELVEIEEETGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIKSGGNEIEKWLLNSDSVEFVEQIGPNSYRGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMMKNKKLQTKDVVRIAVDVAEGIKFMNDHGVAYRDLNTRGILLDKHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKHIMTKCWNNTPSKRPHFSEILAILLRPNNNNR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1955 588 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g1955 588 ProSiteProfiles Protein kinase domain profile. 330 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1955 588 Gene3D Transferase(Phosphotransferase) domain 1 323 584 - -
Gso2g1955 588 SUPERFAMILY Protein kinase-like (PK-like) 307 580 IPR011009 -
Gso2g1955 588 PRINTS Tyrosine kinase catalytic domain signature 401 414 IPR001245 GO:0004672|GO:0006468
Gso2g1955 588 PRINTS Tyrosine kinase catalytic domain signature 437 455 IPR001245 GO:0004672|GO:0006468
Gso2g1955 588 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Gso2g1955 588 PRINTS Tyrosine kinase catalytic domain signature 551 573 IPR001245 GO:0004672|GO:0006468
Gso2g1955 588 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 584 - -
Gso2g1955 588 PANTHER SERINE-THREONINE PROTEIN KINASE 1 584 - -
Gso2g1955 588 MobiDBLite consensus disorder prediction 34 53 - -
Gso2g1955 588 MobiDBLite consensus disorder prediction 34 51 - -
Gso2g1955 588 Pfam Protein tyrosine and serine/threonine kinase 365 579 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1955 Gso-Chr2 43900594 43905666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1955 321 580 MAP Kinase Kinase Kinase AT2G17700 34.457 7.59e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Gso2g1955 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1955 - - gmx:100801110 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0521 18 5291923 5296278 Gso2g1955 2 43900594 43905666 PCT
Gso2g1955 2 43900594 43905666 Gso18g0521 18 5291923 5296278 PCT