Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1951 ATGGCACCATTCACTCCGTCGAAGTTGCTTCTGTTAACTCTGGTTTTCACGTTGAGCCAGAAACAGAGTCTCTGTTCCACGCTCAAGAGCGAAGAAGGTTTGGCGCTGCTGGCGTTGAGGGAGCGAGTGGTGAGTGACCCGCAGGGGGCTTTATCAAGTTGGAGTGGCGATGGAGACATTGATCCTTGCTCGTGGTTCGGTGTGGAGTGTTTTCATGGTTATGTTGTGACCTTGAATTTAAAAGACCTTTGTCTTGAAGGAACACTAGCACCAGAAATTGGAAAGCTGACTCACATAAAATCAATCATTTTGCGCAACAATTCCTTCTTTGGAGAAATTCCCAAGGAGATACTACACTTAGAAAAATTGGAAGTCCTTGACTTGGGATATAACAACTTTAGTGGATCACTTCCATTTGACCATGGCAGTATGCCATCCCTGACCACTCTTTTATTGGACAACAATTACTATCTTACCAACTTAACTCCAGAGCTGTATAAGCTCAAGATGAATTCTGAATTTCATGCCAATGAAGAACAACTAACTGGTGCCACCACTAGAGAATTATTTGTTTGCAGATGTCATTTACGGCACATTGGCCAACATGGGGATAGATCATACAGGAGGCAACTTCTCAAGGTAGCAAATGATGCTAATACACCTAGAATCCAAGGGAATGTTAACCGAGGGACACTTAAACAATCAGCATCACATTTCGCTTTTTCATTACCCCCAGATTTTGAGCCCTTCTCATCATCACCATCGGAAAGTCCTTCATATTCACCAGGAGCAGCTCCATTATCATATTCGCCTTCGCCATTGCCATCTCCCTCCAGTATTTTTTTCACTCCTTCACCCTCTCCTTCACCTGTAGTACCCTCTCCTTCACCTGTAGTGTTACCAACTCCAGGCATATCATCCCCAGCAAACACACTACCACCCGAGTTTAATTGGGCGCCTAGCCCTTCACCATTTTCTAACCAAGGAAACACAGACAGTTCCAATCAAATACATCATTCGGTGATAATCTGGTTTGCAGTTGGGGGCTTCTCCTTATTGATTTTGGTGTCAGCCATTATTTTTGCTTGTTTCCAAAGTAGGAAGGTTGTGGCTGTTAAACCATGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCTTTCGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTCTGAATATTTCAGTAACATCATTGGTTCTCTTCCTGATGGAACTGTCTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCATCTGCAGTGACCACAGCTAAAAACTGGTCAAAAAGTATGGAAGCTCAATTCAGAAAGAAGATTGCGACATTATCTAGGGTGAACCACAAGAATTTTGTGAATCTCATTGGGTATTGTGAAGAGAATAAGCCATTCTCAAGAATGATGGTGCTTGAGTATGCTCCAAATGGAACACTATTTGAGCATCTACACATTAGAGAAGGCGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGGATAGCCTACTGCCTAGAGTATATGCATGAGCTGAAACCACCCATTGCCCATAGAAACCTGCAATCTTCCTTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGATACAAAGAATGGGTCTGCAACCACACAATTCTTGGAAACATCGTCAGCCGATACCAAGGACAATGTTTACAGCTTTGGAATAGTATTGTTTGAGTTGATTACAGGGAGAATTCCCCTTGCTGGGAACAATGAACTTCTGGCAGATTGGGCAGCAGAATATGTAAGGTGGGGGAAATCCTTAAGAGATGTTGTGGATCCAAGGCTGAAGTCTTTGCAGGAAGAAGAGATTGAGGAATGGTCTGAAGTGATAAGAAACTGTGTACAACCAGATCCGGAGAAAAGGCCAACTATGAAAGAAGTTACATCTAGACTCAAGGAAATCACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCAATTACATCCACTGATTCAAGTTGA 2091 0.4304 MAPFTPSKLLLLTLVFTLSQKQSLCSTLKSEEGLALLALRERVVSDPQGALSSWSGDGDIDPCSWFGVECFHGYVVTLNLKDLCLEGTLAPEIGKLTHIKSIILRNNSFFGEIPKEILHLEKLEVLDLGYNNFSGSLPFDHGSMPSLTTLLLDNNYYLTNLTPELYKLKMNSEFHANEEQLTGATTRELFVCRCHLRHIGQHGDRSYRRQLLKVANDANTPRIQGNVNRGTLKQSASHFAFSLPPDFEPFSSSPSESPSYSPGAAPLSYSPSPLPSPSSIFFTPSPSPSPVVPSPSPVVLPTPGISSPANTLPPEFNWAPSPSPFSNQGNTDSSNQIHHSVIIWFAVGGFSLLILVSAIIFACFQSRKVVAVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAASEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVTTAKNWSKSMEAQFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVLEYAPNGTLFEHLHIREGEELNWTMRMRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCDTKNGSATTQFLETSSADTKDNVYSFGIVLFELITGRIPLAGNNELLADWAAEYVRWGKSLRDVVDPRLKSLQEEEIEEWSEVIRNCVQPDPEKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1951 696 Pfam Protein tyrosine and serine/threonine kinase 409 665 IPR001245 GO:0004672|GO:0006468
Gso2g1951 696 ProSiteProfiles Protein kinase domain profile. 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1951 696 Gene3D Ribonuclease Inhibitor 29 224 IPR032675 -
Gso2g1951 696 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 9 695 - -
Gso2g1951 696 SUPERFAMILY L domain-like 41 194 - -
Gso2g1951 696 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gso2g1951 696 SUPERFAMILY Protein kinase-like (PK-like) 402 665 IPR011009 -
Gso2g1951 696 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
Gso2g1951 696 Gene3D Transferase(Phosphotransferase) domain 1 487 675 - -
Gso2g1951 696 PANTHER PROTEIN MALE DISCOVERER 2 9 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1951 Gso-Chr2 43855361 43861993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1951 30 668 Receptor kinase-like Gene Family AT1G25320 25.352 1.81e-47 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso2g1951 PK_Tyr_Ser-Thr 4.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1951 - - gmx:100809790 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0526 18 5383740 5391951 Gso2g1951 2 43855361 43861993 PCT
Gso2g1951 2 43855361 43861993 Gso18g0526 18 5383740 5391951 PCT