Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1948 ATGGTATTGAAGGAGTTCAAAATCCGAAGCTATGAGTGTCAATTCGATAGAGCTCAGGTAGAAGATCTTGAGAGAAGATGCAAGGTGGCAGAGATGGACAACGAATTGGTTGGTGTCATTCAAGGCTCAATAAAAACGGTCACACTTCATAATCATCATCCTAATAAGGATATGGCAAAGGTAGGGTACGTCTTAGGCCTAAGAGTTTCTCCACATAATAGAAAAAAAGGCATTGGCTCAAGCCTAGTGCAAAAGCTAGAAGAATGGTTCACTTCCAATGATGTGGACTATGCATACATGGCCACAGAGAAAGAAAACCATGCATCAATCAATCTCTTCATGAACAAGTTTGGCTACATCAAGTTTAGGACTCCATCTATACTCATAAACCCAGTGAATCATCACCCTTTTGGAATCTCATCCAACATAGAGATAGCCAGGATCAAGGTTGAAAAAGCTGAATCCCTCTATAGAGGGTTCATGGGAGCATCCACTGAGTTCTTCCCTAGTGACATAGAGAATATACTAACCAACAACCTAAGCTTGGGAACATGGGTGGCTTATTTCAAAGGGGATAGTGGTTTTGGTAATTTAGAAGGAAAAGTCCCCAATAGTTGGGCTATGCTTAGTGTATGGAATTGTGGGGAAATCTTCAAGCTAAGGCTAGGGAAAACACCTTTGTCTTGCATGCTATTCACAAAGAGTTTGAGCTTGATGAATAGAATCTTCCCTTGCTTGAAATTGCCCACCTTGCCTAATTTCTTTAGTCCTTTTGGATTCTACTTCATCTATGGGGTGTACCAAGAAGGGCCTTTCTCTGGGAAGCTGGTGAGGGCCTTGTGCAAGTTTGTGCACAACATGGCTTCTAAGACTGAGCATTGCAAGATCATTGTGACAGAAGTTGGAGAAAGAGATCATGAGCTTATTCATCATGTTCCACATTGGAAATTGTTCTCATGTCCAGACTTGTGGTGTATAAAGGCTTTGAAGAAAAATGGAAGAACAAACAGGTTTCATGAATTAACCAACACCCCACCAAGAGGTCTCTTTGTAGACCCGCGAGAAGTCTAA 1071 0.4155 MVLKEFKIRSYECQFDRAQVEDLERRCKVAEMDNELVGVIQGSIKTVTLHNHHPNKDMAKVGYVLGLRVSPHNRKKGIGSSLVQKLEEWFTSNDVDYAYMATEKENHASINLFMNKFGYIKFRTPSILINPVNHHPFGISSNIEIARIKVEKAESLYRGFMGASTEFFPSDIENILTNNLSLGTWVAYFKGDSGFGNLEGKVPNSWAMLSVWNCGEIFKLRLGKTPLSCMLFTKSLSLMNRIFPCLKLPTLPNFFSPFGFYFIYGVYQEGPFSGKLVRALCKFVHNMASKTEHCKIIVTEVGERDHELIHHVPHWKLFSCPDLWCIKALKKNGRTNRFHELTNTPPRGLFVDPREV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1948 356 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 356 - -
Gso2g1948 356 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 30 - -
Gso2g1948 356 Pfam Acetyltransferase (GNAT) family 8 119 IPR000182 GO:0016407
Gso2g1948 356 CDD NAT_SF 29 99 - -
Gso2g1948 356 Gene3D - 7 125 - -
Gso2g1948 356 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 133 IPR000182 GO:0016407
Gso2g1948 356 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 356 - -
Gso2g1948 356 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 30 - -
Gso2g1948 356 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 125 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1948 Gso-Chr2 43821000 43822571 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso2g1948 Acetyltransf_1 7.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1948 - - gmx:100799505 728.398