Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1946 ATGCCAAGTCAATCCGAGTCACCAAGCAACTCACTGAGTCAACTCTCTCGGAACATGTTCTCCGACAACAACAGCAACATCATGCTCGCAGCCATAGTTTCCTTGCTCCTAGTAATCCTCTTTGTCCTCCTACTCCATGTGTACGCCAAATGGTTCTTATTCCAGGCACAAACACGTTCGCAGACTCGCTGGCGGCGAACTCCGGTGACCGTCTCCGGCGTTCTGGAACCTTCCCATTTTCATAGTATCAACATAGAATCCTCACCCACGTGCAACAAAGGCCTTGACTCGGCCTCACTTTCGGCAATTCCAATGTTTGTGCAAGGAACAGAGAAAACAGAGGAATCGGAATGTGTCATTTGCTTGAGTGTTATTGAAGAGGGTGAGATTGGAAGGGGATTGCCGAAGTGTTGCCATGCTTTTCACATGGAGTGCATTGACATGTGGTTGAGTTCACATTGCAATTGTCCAATTTGTAGAGCTCCTATTGTGGTAAGTGGAGATTCTCAATTGGGTTCTGTTGATGGTGATAGTGATGGTGTGGTTGAGATTGTGGTTGTTACTCCCAGTTATGAGAGTAGTGAGAATGAGCATGGTGAAGTGAGTGATTCTGTTCCTGAAACTTCTTCATCTTCGTTGGGTTTCTCTCTGAAGAGATTGCTGAGTAAGGTTTTTCTGTCACCTGATCATGTAACTGAATTGGATGCTTCGCAGTAA 717 0.4589 MPSQSESPSNSLSQLSRNMFSDNNSNIMLAAIVSLLLVILFVLLLHVYAKWFLFQAQTRSQTRWRRTPVTVSGVLEPSHFHSINIESSPTCNKGLDSASLSAIPMFVQGTEKTEESECVICLSVIEEGEIGRGLPKCCHAFHMECIDMWLSSHCNCPICRAPIVVSGDSQLGSVDGDSDGVVEIVVVTPSYESSENEHGEVSDSVPETSSSSLGFSLKRLLSKVFLSPDHVTELDASQ* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1946 238 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Gso2g1946 238 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 233 IPR044675 -
Gso2g1946 238 CDD RING-H2_EL5_like 117 160 - -
Gso2g1946 238 Pfam Ring finger domain 117 160 IPR001841 -
Gso2g1946 238 SUPERFAMILY RING/U-box 110 166 - -
Gso2g1946 238 PANTHER - 1 233 - -
Gso2g1946 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 166 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1946 Gso-Chr2 43787440 43788881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1946 26 161 Rapid Response to Elicitors AT3G16720 39.568 1.27e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1946 - - gmx:102665763 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1651 14 48598557 48600647 Gso2g1946 2 43787440 43788881 GST
Gso18g0536 18 5536531 5537640 Gso2g1946 2 43787440 43788881 PCT
Gso2g1946 2 43787440 43788881 Gso18g0536 18 5536531 5537640 PCT