Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1937 ATGTCTCTGAATCATTCTCCAATGGATGTTGATGGTGAGAATTCTCATGTGAGCAATAAGCGTAGAAAAGGGTCGAGGAAAAGAAAGCTTCTCGTCAACCAAAGAGTTGAGTTGAAGAGTGTGGAAGAGGGTTTTCAGGGCTCATGGCACCCGGGGACGGTAGTCCGTTGCGGGAGGCAGAAACGTCATGTCAAATATGACAACATTTTAGATGATGATGGATCAAAGTATCTTGTGGATGTGGTGTATGTTTCAGCTGTTTTGGATGGTCTTGGTTCTTCAGATTGTAGCAATGAACGCGGATTCATTAGACCACTGCCTCCTCCGCTTGCGTTTGGGGAGAGGGACCTTCCATTTGGTCTCTGTGTTGATGTGAATTATGAAGAAGCATGGTGGGAAGGAGTTATATTTGATCATTGCAATGGAACGAAGGAGAGGAGCATTCTCTTCCCGGATTTGGGTGATGAAATCAAGGTTGGAATTCATCAATTGAGGCTAACTCAGGATTGGGATGAAGCCACCGAGAATTGGGAGCTCCGAGGGAAGTGGGTGTTCCTTGAGATGGTTGAGGAGTTTGATAAGGAATCCGTCATTGCTGTTTCGCTAAAGCAAATATGGTATGATGTGAGGGCAACAAAGGAGTTTGATGACAACTTAAAGCACTGGACTTGTAATGTGAAGGAATTGTGGAGAGACCTCGTAAAAGAGGTGATTGGTGACTACTATCTTCTTACACTAGAACAAGTTTTCCCAGCCTTAAACCTTCCGGAGGAGTTCTTGAAAGAAACACCAGAGTCAGTTGACAGGATTCAGGTTGAGCCAAACTTGTTGAATGGCAATACAAAATGCGGTGGCATCATTCCCCTTCAAGAGGAATATGATAAAGATCCTTTGGTGGACTTGGAATCCGAGAAGGAAATTATTTTGCAGGTAGAACCAGCATCTCCAGTTCAAGAGATCATGCCTGAGGCTGGTGAAGTAATGCCAGGTGCTAGCAGGTGTGCAAAGAAGAGAAAACGTAGACGCACAGCATCCATATGTTGGAAACGGCTGGAACTGAGAAACGCTGAATTCTGTCCTGATGTTATTAATGAATATATACGTGGATGTGGGAGCAAGACCGTTAGGGAACTTTTGAAGACTAAAGTACGGAAACATCTTGCATATCTTGGATGGAAAATTGAGTGGGCTGAAGATAAATATTTTCCTGGGCGAGGACGTTACAGGTACAAGTCACCTGATGATGCACAGGACCAGAAGGTTTACACTTCAATTATTCAAGTTTTAACACAACTCCAAATGGAGTCCAACATGAACAATGTGCAGCCACAAATTGATCATAATAGGATGCATTCTACAAATGACTCTAATCTTTCACATCTGCTTTCAGATTTACCCCCAAATGACCAGGATGTAGATGTTTGTCATCCAAAACAGAAACCTTCTAATGCTAAAGTTGTAGTTGAGCCAGAATTTTGTCCTGAAGCTGTTGTTAAATATTACTTGAATGCATCAAAGAGACATCATTGGGTTGATAAAGTCAAATGGAGACTGAAAGCTAAGAAGCATTTGTTAGCAGAAGGATGGACCTTTGAGTACCCAACCAAGAAGCGAAAGACAACTTTGTATATGTCTCCAGGAAATCAGTGGTTGGGCTTCCTTCGAGGTGCATGCAGAATACATATTAAAGAAAAGATTTCTGAATGGACTAATTCTGGCATGATACCTTTGAATGTCCCAGCCGTGAATGAGAGCAAGAACGGTGAAGGTGATGTTGATAGTGAGGATCTATTACAAATTTTGTCCCAATTGCTTAAAAAAGAGCCTGCCTTGCTAACTGCTTCCCCAGAATGTAGATCAACTGAGAATAGAAACCATAGATGCACCCGTAATTCAAAAGCTTCCATGCCAAAGAGCCACAGGAAAGGATCACCAACACGTGTGCTATGGTCAAGCAAAAGGGTGCAAAAGGTGTCTGCCCCTTCTCCGTCACACAAAAGACATCAAAATGTCTTGTCTTGGTTGATCGATAACAGTGTGGTGATGTCAAGATGTAAGGTCTATTACTGGGCAGGAGGCAGGAACTCTAAAGTGTCTGAGGGGAGGATAACTTATGATGGAATCAAGTGTAGCTGTTGCTCAAAAATATATGGTCTTGGTGGCTTTGTTAATCATGCTGGTGGAAGTAGTGACTGCAGGCCTTCTGCTAGTATCTTTTTGAAGGACGGTAGGTCACTCTTAGATTGCATGATAAAAGTGATGCATGATCATAGAACAAGCGAAGATATGAACAGACCAAGCAGTGATCTGTTTGAAGGAGAAAATGACAACATTTGTTCTGTCTGTCAAGATGGCGGTGAACTTGTTTTATGTGACCAATGTCCATCAGCATTTCATAGCACGTGTCTTGATTTGGAGGATATCCCTGATGGTGACTGGTTTTGTCCATCTTGTTGTTGCGGGATTTGTGGACAAACCAAAATAGAAGGGACTGAGGATGGTGATTTACTTGCTTGCATTCAATGTGAACATAAATATCATGTTGGATGCTTGAAAGATAGAGAAAAATATGAGTCAAGAATATATATGAAAAATTGGTTGTGTGGAAAAGAGTGTGAACAGATATATGAAGGCCTCCAAAGTCTATTAGGAAAGCCACTTATAGTGGGCACGGACAATCTAACTTGGACATTGGTGAAGTTTATCAACTCTGAGAGTTGCGATGTTGGTAGTACTAAGAATGACTTATTGGCAGAGACATACAGCAAACTCAGTGTTGCACTTTCGGTGATGCACGAGTGTTTTGAGCCATTAAAGAACCCTTTTACTAGTAAAGACATCATAGATGATGTTATATTTAACACTAGGTCAGACCTTAATAGATTGAATTTCGAAGGTTTCTACACTGTACTTCTGGAGCAAAATGAAGAACTAATTAGTGTAGCAACAATTAGGGTCTTTGGACAGAAAGTAGCAGAGGTACCGCTTATAGGTACCAGAATACAATATCGTCGACTTGGAATGTGTCGAATTCTAATGGATGAGCTTGAGAAGAGGCTCACACAAATTGGAGTGGAGAGGCTAGTCTTGCCTGCTGTTCCTGATATGCTAGAAACATGGACCAACTCTTTTGGTTTTGCAAAGATGACAAATTTTGAGAGGTCACAGTTCTTGGACTGTGCTTTCCTAGAGTTTCAGGAAACCGTCATGTGCCAGAAGCTGTTAACAAGGAGTCCATCCCCCAAATTGGGTTTAACAAGAGAGATGCAACCAAAACCACATGATGTTTGTCAAATGTAA 3300 0.4176 MSLNHSPMDVDGENSHVSNKRRKGSRKRKLLVNQRVELKSVEEGFQGSWHPGTVVRCGRQKRHVKYDNILDDDGSKYLVDVVYVSAVLDGLGSSDCSNERGFIRPLPPPLAFGERDLPFGLCVDVNYEEAWWEGVIFDHCNGTKERSILFPDLGDEIKVGIHQLRLTQDWDEATENWELRGKWVFLEMVEEFDKESVIAVSLKQIWYDVRATKEFDDNLKHWTCNVKELWRDLVKEVIGDYYLLTLEQVFPALNLPEEFLKETPESVDRIQVEPNLLNGNTKCGGIIPLQEEYDKDPLVDLESEKEIILQVEPASPVQEIMPEAGEVMPGASRCAKKRKRRRTASICWKRLELRNAEFCPDVINEYIRGCGSKTVRELLKTKVRKHLAYLGWKIEWAEDKYFPGRGRYRYKSPDDAQDQKVYTSIIQVLTQLQMESNMNNVQPQIDHNRMHSTNDSNLSHLLSDLPPNDQDVDVCHPKQKPSNAKVVVEPEFCPEAVVKYYLNASKRHHWVDKVKWRLKAKKHLLAEGWTFEYPTKKRKTTLYMSPGNQWLGFLRGACRIHIKEKISEWTNSGMIPLNVPAVNESKNGEGDVDSEDLLQILSQLLKKEPALLTASPECRSTENRNHRCTRNSKASMPKSHRKGSPTRVLWSSKRVQKVSAPSPSHKRHQNVLSWLIDNSVVMSRCKVYYWAGGRNSKVSEGRITYDGIKCSCCSKIYGLGGFVNHAGGSSDCRPSASIFLKDGRSLLDCMIKVMHDHRTSEDMNRPSSDLFEGENDNICSVCQDGGELVLCDQCPSAFHSTCLDLEDIPDGDWFCPSCCCGICGQTKIEGTEDGDLLACIQCEHKYHVGCLKDREKYESRIYMKNWLCGKECEQIYEGLQSLLGKPLIVGTDNLTWTLVKFINSESCDVGSTKNDLLAETYSKLSVALSVMHECFEPLKNPFTSKDIIDDVIFNTRSDLNRLNFEGFYTVLLEQNEELISVATIRVFGQKVAEVPLIGTRIQYRRLGMCRILMDELEKRLTQIGVERLVLPAVPDMLETWTNSFGFAKMTNFERSQFLDCAFLEFQETVMCQKLLTRSPSPKLGLTREMQPKPHDVCQM* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1937 1099 PANTHER PHD ZINC FINGER PROTEIN 6 1099 - -
Gso2g1937 1099 SMART ring_2 820 875 IPR001841 -
Gso2g1937 1099 SMART ring_2 779 818 IPR001841 -
Gso2g1937 1099 Pfam Agenet domain 34 108 IPR008395 -
Gso2g1937 1099 Pfam PHD-finger 778 820 IPR019787 -
Gso2g1937 1099 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 770 819 IPR013083 -
Gso2g1937 1099 SUPERFAMILY FYVE/PHD zinc finger 761 819 IPR011011 -
Gso2g1937 1099 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 820 875 IPR013083 -
Gso2g1937 1099 SMART agenet_At_2 115 172 IPR014002 -
Gso2g1937 1099 SMART agenet_At_2 28 111 IPR014002 -
Gso2g1937 1099 CDD NAT_SF 970 1030 - -
Gso2g1937 1099 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 965 1046 IPR016181 -
Gso2g1937 1099 ProSiteProfiles Zinc finger PHD-type profile. 776 821 IPR019787 -
Gso2g1937 1099 MobiDBLite consensus disorder prediction 1 26 - -
Gso2g1937 1099 SMART PHD_3 820 872 IPR001965 -
Gso2g1937 1099 SMART PHD_3 778 819 IPR001965 -
Gso2g1937 1099 CDD PHD2_CHD_II 779 818 - -
Gso2g1937 1099 Gene3D - 933 1068 - -
Gso2g1937 1099 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 914 1069 IPR000182 GO:0016407
Gso2g1937 1099 MobiDBLite consensus disorder prediction 621 646 - -
Gso2g1937 1099 Pfam Tify domain binding domain 701 752 IPR032308 -
Gso2g1937 1099 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 1099 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1937 Gso-Chr2 43644149 43650797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1937 30 1018 PHD Transcription Factor Family AT5G58610 35.069 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gso2g1937 Agenet 1.3e-15 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1937 - - gmx:100806062 2245.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1642 14 48464838 48471960 Gso2g1937 2 43644149 43650797 GST