Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1926 ATGCACATGAACACCTACTCGGAAGCCACCACATCACAATTACCAATACCACCAACCATGGACGAAGATTTGGAGAATAACACGGAGGTTTGTGACGGTAACAATGCAATGACACCAATGGTGAGAAAGAAGTCAGAACTAGTTGTGGTCGCAAATAATAACTCTCGTTTACAAATGCTTAGGAATTTCATGACCAATTTGCAAGAGGTCTTCTTCGGCACTAAGCTTGTGGTGCTTTTTCCGGCAGTCCCTTTGGCTGTTGTTGCAAATTTTTATAGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTACTTGGACTTGCTCCGCTAGCTGAACGCGTTAGCTTCCTGACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTGAATGCAACATGTGGAAATGCAACCGAAATGATCATAGCATTGTTAGCACTTCACCAGAACAAAGTTCATGTTGTGAAGTTGTCCCTGCTGGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGAAGTTCACTCCTCTGTGGTGGTTTAGCCAATCTTAAGAGAGAACAAAGATATGACAGAAAACAGGCTGATGTAAATTCACTGCTTTTGTTGCTGGGGTTGTTGTGCCATTTGCTGCCATTGCTGTTCAAATACGCCTTAGGAGGAGGCGATCATTCTATAGCCACTAGCACTCTTCAGTTGTCAAGAGCAAGCAGCGTTGTTATGCTTCTAGCATACGCTGCTTACATCTTCTTCCAATTGAAAACCCATCGTAAATTGTTTGATGCACAAGAGGTGGACGAAGATGAAGAGAAGGCAGTTATAGGATTTTGGAGTGCATTTACGTGGTTGGTGGGTATGACATTGGTCATATCTCTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTGCCAATTGTTGGAAATGCCGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCGTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAGTCTTCTTGAAACTGGATGTCTTGCTTTTACAATTATAATTACAGCGTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTGATTCTTACTCTCTGTTACATTGTCATTGGAGCATGTTTTTTTGTTCTCAAAACTCCTCTAATTGGGCAATCTCCTAAGGCCAGTTTTGGAGTTAAACCATCCTTTGAAGCCATCACCACTTAA 1353 0.4191 MHMNTYSEATTSQLPIPPTMDEDLENNTEVCDGNNAMTPMVRKKSELVVVANNNSRLQMLRNFMTNLQEVFFGTKLVVLFPAVPLAVVANFYSFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALGGGDHSIATSTLQLSRASSVVMLLAYAAYIFFQLKTHRKLFDAQEVDEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIITAFTLQDGTSHYMKGVILTLCYIVIGACFFVLKTPLIGQSPKASFGVKPSFEAITT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1926 450 TIGRFAM cax: calcium/proton exchanger 81 424 IPR004798 GO:0006816|GO:0015369
Gso2g1926 450 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g1926 450 MobiDBLite consensus disorder prediction 1 17 - -
Gso2g1926 450 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016021|GO:0055085
Gso2g1926 450 Pfam Sodium/calcium exchanger protein 281 419 IPR004837 GO:0016021|GO:0055085
Gso2g1926 450 Gene3D - 127 424 IPR044880 -
Gso2g1926 450 TIGRFAM caca2: calcium/proton exchanger 62 424 - -
Gso2g1926 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso2g1926 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 24 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1926 Gso-Chr2 43500586 43506552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1926 34 429 Antiporters AT2G38170 66.832 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1926 K07300 - gmx:100802344 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1629 14 48287357 48292543 Gso2g1926 2 43500586 43506552 GST
Gso18g0558 18 5864181 5869488 Gso2g1926 2 43500586 43506552 PCT
Gso2g1926 2 43500586 43506552 Gso18g0558 18 5864181 5869488 PCT