Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1907 ATGAAGAAAACACCTCCCCCCAATTTGCATCAATCTAGCAAAAGTAGACAGAATGCTAATCTCCAACTTGTTGAAACAAACAATGATGCAAAGAGGCACAATTCTAAGACATTGAGATCTTTGAAGTATGCTGCCAAGAAATGTGTAGCTGTTTTTTCATTGATTATCTATGGCAAAAGAAAATCAGCCTCATATGTTGTTGGCAATGATGACAGGAAGAATACATCCAAAATTAGAGGGGTGGTATCATCATCAACTGATTTATCATCTGAGAGTACCACCAAGAATTCATCAAAATGGAAGTTTTCTTACTCCTATGCATCATCCAGCACTGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTACAAGTCAACGGCAAAATTCTCTCCAGCTAATGAAATTGGGCAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTCGCTGTGAAGCGTGCCAAGAAGGCTGTGATTCAGAATCACTTACATGAGTTCAAGAATGAAATATACACGTTGTCGCAAATTGAGCATCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATATGTTGGTAATGGTAACCTTCGAGAACATCTAGATGGTATTCGGGGAGAAGGACTAGAAATCGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACGGATAATCCAATTATCCATAGAGACATCAAAGCATCGAACATCCTAATCACGGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCTCGGTTGTCTGACGATCCTAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATACCAACTCACTGAAAAGAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGATGACAGGACGACATCCAATAGAACCAAAGAGACCAGTTGATGAGAGAGTGACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATTCAGCCTCCATCAAGGCAGTAAAGCAGGTTCTCAAGCTAGCTCTCCAATGCATTGCGCCTTCGAAACAATCACGTCCGCCTATGAAGAATTGTGCAGAGGTTCTGTGGGACATCCGCAAAAGTTTTAGAGATGAAGCCAATTCTGATCATGCTCCCCTTCCTTCTCACCATTCTGCAAACTTTCCTCAAAGAGAAAAGAATACGTTTGAAGTCTGA 1326 0.4072 MKKTPPPNLHQSSKSRQNANLQLVETNNDAKRHNSKTLRSLKYAAKKCVAVFSLIIYGKRKSASYVVGNDDRKNTSKIRGVVSSSTDLSSESTTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPANEIGQGGFGTVYKGKLNDGSIVAVKRAKKAVIQNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPNATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKRPVDERVTIRWAMKMLKQGDAVFAMDPRLRRNSASIKAVKQVLKLALQCIAPSKQSRPPMKNCAEVLWDIRKSFRDEANSDHAPLPSHHSANFPQREKNTFEV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1907 441 PANTHER RECEPTOR-LIKE PROTEIN 55 23 435 - -
Gso2g1907 441 SMART serkin_6 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1907 441 Gene3D Transferase(Phosphotransferase) domain 1 210 427 - -
Gso2g1907 441 SUPERFAMILY Protein kinase-like (PK-like) 114 406 IPR011009 -
Gso2g1907 441 MobiDBLite consensus disorder prediction 416 441 - -
Gso2g1907 441 Gene3D Phosphorylase Kinase; domain 1 91 209 - -
Gso2g1907 441 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gso2g1907 441 Coils Coil 16 36 - -
Gso2g1907 441 Pfam Protein tyrosine and serine/threonine kinase 137 405 IPR001245 GO:0004672|GO:0006468
Gso2g1907 441 CDD STKc_IRAK 139 405 - -
Gso2g1907 441 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 23 435 - -
Gso2g1907 441 ProSiteProfiles Protein kinase domain profile. 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1907 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1907 Gso-Chr2 43332319 43336485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1907 105 398 Receptor kinase-like Gene Family AT1G79620 44.518 4.53e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gso2g1907 PK_Tyr_Ser-Thr 7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1907 - - gmx:100788236 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1605 14 48049549 48053328 Gso2g1907 2 43332319 43336485 GST
Gso2g1907 2 43332319 43336485 Gso18g0880 18 12149375 12154644 PCT
Gso2g1907 2 43332319 43336485 Gso8g2563 8 43079095 43084324 PCT