Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1903 ATGGGCCTTTCAAGTCTCCCAGCACCATCTGAAGGAGTATTATGTGTCCTTCTGGTGAACACTGTATTGTCAATTTCAATATTCAAAGGCATTGTTAGGACAATCCTACACATTGTTGGCATCCATCTTTCATCATCATCCTCCACTTCACCCTCTTCACCGGATCCCTCGCTAACCGCACCTGAGTCATTTGAATTCCATCTTAGTCCCTCTGAGAGTTACATTGAAGAGTTCAGAGGCCGGACGCCAACACTTCGGTTCGACAGTGTGTGCTGCTGTAAACAACCTGAACATGACTGCTCTGTATGCCTCACTCAGTTTGAACCGGAATCGGAGATAAACCGCTTATCGTGCGGCCATCTCTTCCACAAAGTGTGCTTAGAGAAGTGGCTGGACTACTGGAACATTACATGCCCTCTTTGCAGGACTCCCTTGATGCCTGAAGATGACACACCTTGCTTTCAGTAA 468 0.4701 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLTAPESFEFHLSPSESYIEEFRGRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDTPCFQ* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1903 155 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Gso2g1903 155 PANTHER - 1 153 IPR044249 -
Gso2g1903 155 Pfam Ring finger domain 99 142 IPR001841 -
Gso2g1903 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 150 IPR013083 -
Gso2g1903 155 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 153 - -
Gso2g1903 155 SUPERFAMILY RING/U-box 99 148 - -
Gso2g1903 155 SMART ring_2 100 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1903 Gso-Chr2 43304323 43306155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1903 1 149 C3H Transcription Factor Family AT2G04240 66.234 4.94e-61 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1602 14 48020942 48022887 Gso2g1903 2 43304323 43306155 GST