Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1899 ATGAAAGTAATAAGCTTTTCCGGTGGCATAACAAAACCCTGTTTTTTTATTGCCCAAACAGAAATGCCTATTCTAACATTTGCTCATTGTAAGCTGAGTGCTACCCTAGCTCTTAGGAGGATGGGGTCCATTACGAGACTTCAATATTCTGTTGCTGATAGGACATTCACTTCTGGTTCCGTGGATTTGCCGGCTTCCAAAACGGACTCTGGTCGAGTGAATCGGAGGCGGGGAGGCGGCTCATCCTCGGTATATAGCCGTCCTAGTTTATCAGAAATGAAGAAGGAGAAGGCAGCAATAAGGGAAAAGGTTTATGAGTTCTTGAGGGCAATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTCCCTGTGACTGTTGATGTTATGAGGGAGCGCGTTGATTTTCTTCATAGTTTGGGGCTTACGATTGAAGACATCAACAACTATCCGCTTGTTCTTGGCTGCAGTGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTTGGAAAATTGGGAGTGAGGAAATCCTCGATCACTCAATTCTTGCAGAGATACCCACAAGTGCTCCATGCTAGTGTGGTTGTGGATCTTATGCCGGTGGTCAATTATCTTAAGGGGATGGATATCAAGTTCGATGATGTTCCTCGTGTTCTTGAGAGGTACCCTGAAGTTCTCGGATTCAAACTTGAGGGAACTATGAGCACATCCGTTGCTTATTTGATTGGAATTGGAGTAGGAAGAAGAGAAATTGGAGGTGTCTTAACTAGATACCCAGAGATTTTGGGGATGCGAGTTGGTAGAGTCATCAAGCCTTTTGTGGAATATCTGGAAAGCTTGGGAATTCCAAGGTTAGCTATTGCTAGACTGATAGAGCAACGGCCTTATATTCTTGGATTTGGGCTGGGTGAGAAGGTGAAGCCAAATGTTAAATACCTTGAAGAGTATAATGTTAGGCGAACATCACTTCCGTCTATAATTGCTCAATATCCTGACATCATTGGAACTGACCTAAATCAAAAGCTTGAAAAACAGAGAAGTTTACTCAATTCTGTACTTGATTTGGATCCAGAGGACTTTGGCCGAGTTGTTGAGAAGATGCCACAGGTAGTTAACCTCAGCAGTGGACCTATGCTGAAACATGTTGATTTTCTTAAGAATTGTGGGTTTTCCTTGCCACAAATGAGGCAGATGGTTGTTGGATGCCCTCAATTACTTGCTTTAAACATTGACATTATGAAACTTAGCTTTGATTACTTCCAAATGGTTATGAAAAGGCCTTTGGAAGACTTGGTTACTTTCCCTGCATTCTTCACTTACGGTTTGGAGTCAACTATAAAACCTAGGCATAAGATGGTTGTCAAGAAAGGGTTGAAGTGTTCTCTGTCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGACATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCACTGACGCAACCAAGAAGTGATGAATCAGATTTTGATTATGAAGACAGCGATGAAGATGATGAGTAG 1557 0.4188 MKVISFSGGITKPCFFIAQTEMPILTFAHCKLSATLALRRMGSITRLQYSVADRTFTSGSVDLPASKTDSGRVNRRRGGGSSSVYSRPSLSEMKKEKAAIREKVYEFLRAIGIVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSSITQFLQRYPQVLHASVVVDLMPVVNYLKGMDIKFDDVPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRREIGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIEQRPYILGFGLGEKVKPNVKYLEEYNVRRTSLPSIIAQYPDIIGTDLNQKLEKQRSLLNSVLDLDPEDFGRVVEKMPQVVNLSSGPMLKHVDFLKNCGFSLPQMRQMVVGCPQLLALNIDIMKLSFDYFQMVMKRPLEDLVTFPAFFTYGLESTIKPRHKMVVKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEPSFDMNSLTQPRSDESDFDYEDSDEDDE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1899 518 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 65 507 - -
Gso2g1899 518 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 324 356 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 81 114 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 361 391 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 428 459 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 SMART mt_12 252 283 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 MobiDBLite consensus disorder prediction 490 518 - -
Gso2g1899 518 PANTHER CGI-12 PROTEIN-RELATED 65 507 IPR003690 GO:0003690|GO:0006355
Gso2g1899 518 MobiDBLite consensus disorder prediction 62 87 - -
Gso2g1899 518 Gene3D Transcription termination factor 3, mitochondrial 137 269 IPR038538 -
Gso2g1899 518 Gene3D Transcription termination factor 3, mitochondrial 270 483 IPR038538 -
Gso2g1899 518 Pfam mTERF 166 474 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1899 Gso-Chr2 43243822 43245968 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso2g1899 mTERF 8.7e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1899 K15032 - gmx:100785223 961.444