Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1891 ATGAAGGAGAAGAAGAGAGGTTTCAAAGAATGGTTCACATCATCCCAAGTTCTATTGGGTATGATACTAGTACAAATTTTTCTTACTGGGTTGCAGTTACTATCAAGGATCATATTGGTTCGTGGCTTTTTCATCTTTTCCCTCATTGTATATCGTCACCTTGTTGCTGCTATTTGTGTTGCCCCCTTTGCATTCTACTTTGAAAGAGACCGCACAAAGAAATATACTTTGAAAGTTTGGTTTTGGCTCTTTGTTAACGCATTGACAGGGATGGTTCTGGCTCAAGGATTATTCTATTATGGTTTGAGAGATACTTCTGCCACTTACTCTGTCAATTTTCTCAACTTGGTTCCTATATCCACCTTCTTTACCTCTATCATATTTAGATGGGAGAAATTGGGTCTGCACACTTGGGCGGGTAGAGCTAAGTGTGGAGGGGCAATTTTGTGTGTTGGGGGAGCATTAGCTACCAGTCTTTACAAAGGGAAGGAATTTTATCTTGGTCATCATAGTCATCATGTTCAAATTGTTGTTGCGGCACACAAAACTCACATGCTTCGGGGCACTTTCCTTTTGATTTGCAGTTGCTTCTCATACACAACATGGTTTATTGTTCAAGTCCAATTGCTTAAAGTATTTCCACTAAGGTATACAGGAACAATGCTAGCATGCATTTTGGCAGCAATTCAAGGAGGAATAATAGGTATTTGCATAGATTCCAGAAAAGCTGCTTGGAGATTAGAGTGGAATTTACAATTGGTCACTATATTGTACTCGGGAGCACTAGCTACAGCTGCTACATTCAGCCTACTATCTTGGGTAATTACAATCAAAGGACCAAGTTATCCCCCAATGTTCAATCCCCTAGGTCTTATTTTTGTGGCCTTTTCAGAAGCTATCATACTTGGCGAACCATTAACCGTTGGAATGTTGCTAGGCATGATTTTGATCATGGTAGGATTATACTTCTTTTTGTGGGGCAAAAACAATGAGACTAAACGCATGGTTCAACAACCAATTGTATCAACTGCAGAAGTATCAAACGTGACTGATTTGTCTACTGGGGCAGAATCAGTGGCCACAATAGTGCCAAATTCTTCACCTACAAATTCAGTAATTCTAGAACTTGAAAAGTCTGACAAAAACTAA 1149 0.3951 MKEKKRGFKEWFTSSQVLLGMILVQIFLTGLQLLSRIILVRGFFIFSLIVYRHLVAAICVAPFAFYFERDRTKKYTLKVWFWLFVNALTGMVLAQGLFYYGLRDTSATYSVNFLNLVPISTFFTSIIFRWEKLGLHTWAGRAKCGGAILCVGGALATSLYKGKEFYLGHHSHHVQIVVAAHKTHMLRGTFLLICSCFSYTTWFIVQVQLLKVFPLRYTGTMLACILAAIQGGIIGICIDSRKAAWRLEWNLQLVTILYSGALATAATFSLLSWVITIKGPSYPPMFNPLGLIFVAFSEAIILGEPLTVGMLLGMILIMVGLYFFLWGKNNETKRMVQQPIVSTAEVSNVTDLSTGAESVATIVPNSSPTNSVILELEKSDKN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1891 382 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Gso2g1891 382 Pfam EamA-like transporter family 21 141 IPR000620 GO:0016020|GO:0016021
Gso2g1891 382 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016021|GO:0022857
Gso2g1891 382 PANTHER WAT1-RELATED PROTEIN 15 344 - -
Gso2g1891 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
Gso2g1891 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1891 Gso-Chr2 43126429 43132395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1891 19 329 Nodulin-like Gene Family AT1G09380 33.962 8.45e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1891 - - gmx:100792281 722.235