Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1890 ATGATTGGAATTTCCTTTGTTCTCTCACATGCTGCTATGGCTTCCTTATCCAATATCTTGCTTATGTTTTGTTTGTTGAATCTTCTAGCATTCCCAGTTTCAGTTCATTCAGCTGGTGAAGTTCCAATTAATGTGACCAAGCACTTTTCTTTCTACAACTTCAGCTTCAGCAACAACCCCAGATTAGTCCATGATATGAAGCTCCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTTCAAATCCCAAATGAATCAGAAGAAGACATAAGACACCAAGCTGGAAGAGGCATCTATTCCTTCCCAATTCGCCTGCTGGATCCAAGCACCAAGACTCCAGCTTCATTCCAAACCACTTTCTCTTTCCAAATGAACAATTCCACTGCCTCTGAGCAAGCTGCTTATGGAGGAAGTGGCCTCACTTTCATCATTGTCCCTGACGAGTTCACCGTGGGAAGGCCGGGACCGTGGCTCGGCATGCTCAATGATGCTTGTGAGAATGACTATAAGGCAGTGGCAGTGGAATTCGACACGAGAAAGAACCCGGAGTTCGGAGATCTGAACAACAACCATGTTGGCATCAACTTAGGTACCATAGTGTCTACTAAAGTCATTAATGTTTCTGATGTTGGACTGTCCCTTAATGATGGTTCTGTTCACCGTGCTTGGATCACCTATGATGGCCCTCAAAGAAGAATGGACATTCGTCTTGGAAGGGCAAACCAAGAGGATTATGATTATCCTCCAAAACCTCTCTTCTCAGAATCTATGGATCTCTCTCCTTTTCTGAATGAGTACATGTTTGTAGGGTTCTCAGCTTCCACAGGTAACCATACACAAATCCACAACATACTCTCTTGGAACTTCACTTCCACAAGCCAAGCTTTTCTTCGCTTGCCTTCATCTGAAACCTGCCAGGGTAAGATCTTACTTGAGAATAGCACTGCTTCCACAGAAGTACCACCAACTTCACACAAGTCTTCTAAGAATGAACCACCACGAAGCTTTTTGATTTTCGTGGCTGCTGTGGCATTGGCTCTGGCTCTTTTCCTTGGCTTTTACTTTATCAGCAAGCACAGAAGAAATGCTGCTAAGTTGAATACTTCAGTGGAGGCAGAGCTTCACATGCCAAGGCCTCCCAACAAGCCACGACGCTTCGCCTTTTCTCAACTTTCATCTTCAACAAGGTCATTCAGTGAGATAGAGTTGCTCGGCAGTGATAATAGAGGAGAGTACTACAGAGGGAAGCTTTCTAATGGCAGCCAGGTGGCTGTGAAAAGGTTCTCAGCTCAGTTTCTCAGCACACATGGATCGGACAAGAAGAGATTGTTGAAGGAAATCAAAGGCGTTAGCCACGTTCGCCACCCGAATTTGCTTCTGGTTAGAGGGTGGTGTCAAGACAACCATGAAATCATGGTGGTCTATGACTTTGTCCCCAATGGCAGCCTAGACAAATGGCTATTCGGGGCCGGTGTTCTTCCGTGGACTCGACGTTTCAAAGTTATTAAAGATGTAGCTGATGGCTTGAGCTTCCTCCACACTAAACAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAATTTCAGAGCTGTTTTGGGTGATTTTGGGTTTGTGTTGATGGGTGCAGAATCAAAACACTTTGAGTCACAAGTGTGCCAAGGTGCTGATGTGTTTGAGTTTGGTGTCCTTGTGTTGGAAGTGATAGCTGGAAGGGTAAGGGATGAGAAAGAGGAGGGAAATCCAGAAGAGAGGAACCTACTGGATTATGCTTGGAACTTGCATCAGATTGATGAAAAGGTGAAGCTGGTGGACAGAAGGATGGGGTCATTGATCAACTTGGAGCAGGCAATTCGCGTTCTCGAAATTGGGTTGCTTTGCACTCTAAATGAGAACAAAGGAAGGCCCTCAATGGAACAAGTGGTGGAGTTTCTTCTCAACATGGATAAGCCTATTCCTGAGCTGCCAAGAACTCGCCCTGTTGCCTTGTTCCCCTATAATAGCGCCAACACAGGACTTTGTAATGCATATTCTTGCACTTTTTAA 2061 0.4508 MIGISFVLSHAAMASLSNILLMFCLLNLLAFPVSVHSAGEVPINVTKHFSFYNFSFSNNPRLVHDMKLLGSAKFSNEKGALQIPNESEEDIRHQAGRGIYSFPIRLLDPSTKTPASFQTTFSFQMNNSTASEQAAYGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDLNNNHVGINLGTIVSTKVINVSDVGLSLNDGSVHRAWITYDGPQRRMDIRLGRANQEDYDYPPKPLFSESMDLSPFLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRLPSSETCQGKILLENSTASTEVPPTSHKSSKNEPPRSFLIFVAAVALALALFLGFYFISKHRRNAAKLNTSVEAELHMPRPPNKPRRFAFSQLSSSTRSFSEIELLGSDNRGEYYRGKLSNGSQVAVKRFSAQFLSTHGSDKKRLLKEIKGVSHVRHPNLLLVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHTKQLAHKNLKCSSVFLDVNFRAVLGDFGFVLMGAESKHFESQVCQGADVFEFGVLVLEVIAGRVRDEKEEGNPEERNLLDYAWNLHQIDEKVKLVDRRMGSLINLEQAIRVLEIGLLCTLNENKGRPSMEQVVEFLLNMDKPIPELPRTRPVALFPYNSANTGLCNAYSCTF* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1890 686 Gene3D - 45 297 - -
Gso2g1890 686 ProSiteProfiles Protein kinase domain profile. 399 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1890 686 CDD lectin_legume_LecRK_Arcelin_ConA 48 293 IPR001220 GO:0030246
Gso2g1890 686 Gene3D Transferase(Phosphotransferase) domain 1 479 657 - -
Gso2g1890 686 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 21 668 - -
Gso2g1890 686 SUPERFAMILY Protein kinase-like (PK-like) 377 650 IPR011009 -
Gso2g1890 686 PANTHER - 21 668 - -
Gso2g1890 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 294 IPR013320 -
Gso2g1890 686 Pfam Legume lectin domain 48 296 IPR001220 GO:0030246
Gso2g1890 686 Pfam Protein tyrosine and serine/threonine kinase 403 544 IPR001245 GO:0004672|GO:0006468
Gso2g1890 686 ProSitePatterns Legume lectins beta-chain signature. 173 179 IPR019825 -
Gso2g1890 686 Gene3D Phosphorylase Kinase; domain 1 369 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1890 Gso-Chr2 43105876 43108494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1890 53 669 Receptor kinase-like Gene Family AT5G55830 32.523 2.02e-93 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso2g1890 Lectin_legB 2.7e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1890 - - gmx:100781464 1341.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1591 14 47858595 47861103 Gso2g1890 2 43105876 43108494 GST