Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1868 ATGGAAGCGCATCCAAACGCGGCCATGCTGAGAACCCGAACTATAATACCTTCTCCTCCACCATCACTCGCCCTGAGTAAGAGGCTGCCGTCACCGTCACCATCACCGTTACCGTTACTGTCACCGTCCGTTATCCTCTCCGAACCCGTGAAACCCTCGTTCCACCGGTTTCCTCTGTTCTCGAATCCTCACACTCTTCGAACCATGACGCTCTCCAAGTGTTTCTCTCACTCCGGGCCCAAACCCGAATCCGAACCCGAACCGGAACCCGATTCACCTCACACTCTCGTTGTGGTTTCATTCTACAAGTTCGCGGATTTCCCCGACCACGCCCTCTTGCGAAATCCCTTGAAGCAACTGTGCCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCACCGGAAGGGATCAATGGCAGCATATGTGGGACTCGGGAGTCAGTGGAGGAAGTTCTTACGTTTGTGGAGAGCGATGATCGATTAAAGGGGCTAAGGCGAGTGGAATCACCTGTTAGTCCTGAGGAGGAGGCCATCCATCATGGGCACAGTGCCACTTCTCCTCTTGCTGCAGGGGAAGATGCGCCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACTGTGTCGCCTATTGAAAGGGTTGGAAAGTATATTGGCCCAGAAGAGTGGAATGCTTTGATTAGCAATCCAGATACAGTGGTAATTGATGTGCGGAATAACTATGAAACCAGAATAGGAAAATTTAAAGGAGCAGTTGATCCTTGTACCACATCATTTCGTGAATTCCCATCTTGGGTGGATGAGCATTTCCAGCTTACTGAAACAGATGATAGGGAGCATCCAAAAGTTGAGGTAAACTCAGTCCAACCTGCTGAAAAAGAAATGGATAATAAAAGACAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTTTCACCTAGAAGGTGGAATTCTAAAATATCTTGAGGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTTGACAAACGAGTCTCTGTGGAGCATGGTTTGGTGCCCGGAAATTTCAAGCTCTGCTATGGTTGCAAACAACCTGTGAGTGATGCTGACATGGAAGCCCCGGAATATGAATATGGAGTCTCTTGTCCTCACTGTTTTGCACAGAAATCAGATGAAGAGAAGGAAAGGGCTCGAGCTCGACAAAGACAATTTGAGAGATGGGGAATCATAGGAGGTCCAGATAAGGGTCGCCGGCCAACTTGTGAACAGGAAAGTACTAATAGGAAACCAAACCAGCTTTCACGTTCTATTTAA 1392 0.4799 MEAHPNAAMLRTRTIIPSPPPSLALSKRLPSPSPSPLPLLSPSVILSEPVKPSFHRFPLFSNPHTLRTMTLSKCFSHSGPKPESEPEPEPDSPHTLVVVSFYKFADFPDHALLRNPLKQLCQRLRVSGGIILAPEGINGSICGTRESVEEVLTFVESDDRLKGLRRVESPVSPEEEAIHHGHSATSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYIGPEEWNALISNPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVDEHFQLTETDDREHPKVEVNSVQPAEKEMDNKRQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEYEYGVSCPHCFAQKSDEEKERARARQRQFERWGIIGGPDKGRRPTCEQESTNRKPNQLSRSI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1868 463 CDD RHOD_YceA 224 351 - -
Gso2g1868 463 Hamap tRNA uridine(34) hydroxylase [trhO]. 94 395 IPR020936 -
Gso2g1868 463 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 94 449 IPR020936 -
Gso2g1868 463 ProSiteProfiles Rhodanese domain profile. 237 358 IPR001763 -
Gso2g1868 463 MobiDBLite consensus disorder prediction 422 463 - -
Gso2g1868 463 Gene3D - 86 210 - -
Gso2g1868 463 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 206 384 IPR036873 -
Gso2g1868 463 Pfam UPF0176 acylphosphatase like domain 97 209 IPR040503 -
Gso2g1868 463 Gene3D - 211 391 IPR036873 -
Gso2g1868 463 MobiDBLite consensus disorder prediction 1 32 - -
Gso2g1868 463 Pfam Rhodanese-like domain 230 351 IPR001763 -
Gso2g1868 463 SMART rhod_4 227 355 IPR001763 -
Gso2g1868 463 MobiDBLite consensus disorder prediction 74 93 - -
Gso2g1868 463 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 94 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1868 Gso-Chr2 42861783 42865339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1868 61 463 Sulfurtransferasese or Rhodanese AT2G40760 69.608 0.0 582