Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1852 ATGGATTCCCGCGACTCCTCCCCTCGCTCCCGCGACCCCGACGCCGACAACAACAACAACCACCACCACCACCGCCGCCAGCCTTCCTTGGACGACGCCCCTCCCAAGGTCAAGCTCATGTGCAGCTTCGGTGGCAGCATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCTCCGGCGACACCAAGATCCTCGCCGTCGACCGCCACGTCAAGTTCCCCTCCCTCATCGCCAAGCTCTCCTCCCTCGCCAACAACACCCCCTCCAACCTCTCCTTCTTCAAGTACCAGCTCCCCGGGGAAGATCTCGACGCCTTGATCTCCGTCACCAACGACGACGACCTCCACCAGATGATGATCGAGTACGATCGCCTCTCCCGCGCCTCACCTAGACCTGCGCGCCTCCGTCTCTTCCTCTTCCCTCTCCACAACAACTGCAATTTCGCTCCAACCGAATCCAAATCCGAGCGCCAGTGGTTCGTCGACGCTCTCAATTCCGTTCACGTTCCAGAAGATTCTCCGCCGCCGCCTCCGGCGACGGCGAATCCGGATTTTCTGTTCGGACTCGACAAGCCGGCGGCGGAGGATGCTCTGGCGAAGGACTCGGAGTGTTTTCCCGAGGATCGTGAAGCCGAACCTCAGATTGAGAATGAGAACAACAGTAAACAACTTCTGCAACGGAAAATGAAGATAGAGGAAGATGATAATAACAATAAGGGTAGGGTTTACGGCGTTAACGGCGGGGGCGACTGTTATGCCCAGAAGAACGCGGAGAAAATGACGCCGTTAGTGGCGCATGCACACGCACACGCACACGCGCAATTCGTTCATCCTGGTTCGGTTACTGGAACGGTGTCGTTCATGCAGGAGAGGAATAATAATAACGCGGGTTATTCGCTGGCGTTTGCTACTACGGGGAATGAGATTTATCTCATTCAGACTCCTTCTGGAATGTTTCAAGCGGTTCGGCCCGTTACTGGGCCGGTTGGTCAACCGGTTTATCTGGTTCACGCACCCGGTCCGGTTTCGCATTCGAAGGTTGGTGCGGCGGTGCACGGTGGTGACGGAAGGATATAA 1080 0.5741 MDSRDSSPRSRDPDADNNNNHHHHRRQPSLDDAPPKVKLMCSFGGSIQPRPHDNHLTYVSGDTKILAVDRHVKFPSLIAKLSSLANNTPSNLSFFKYQLPGEDLDALISVTNDDDLHQMMIEYDRLSRASPRPARLRLFLFPLHNNCNFAPTESKSERQWFVDALNSVHVPEDSPPPPPATANPDFLFGLDKPAAEDALAKDSECFPEDREAEPQIENENNSKQLLQRKMKIEEDDNNNKGRVYGVNGGGDCYAQKNAEKMTPLVAHAHAHAHAQFVHPGSVTGTVSFMQERNNNNAGYSLAFATTGNEIYLIQTPSGMFQAVRPVTGPVGQPVYLVHAPGPVSHSKVGAAVHGGDGRI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1852 359 MobiDBLite consensus disorder prediction 1 35 - -
Gso2g1852 359 Pfam PB1 domain 53 142 IPR000270 GO:0005515
Gso2g1852 359 PANTHER OS05G0427100 PROTEIN-RELATED 2 335 - -
Gso2g1852 359 Coils Coil 216 236 - -
Gso2g1852 359 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 2 335 - -
Gso2g1852 359 SUPERFAMILY CAD & PB1 domains 52 146 - -
Gso2g1852 359 MobiDBLite consensus disorder prediction 1 32 - -
Gso2g1852 359 Gene3D - 57 142 - -
Gso2g1852 359 SMART PB1_new 51 143 IPR000270 GO:0005515
Gso2g1852 359 CDD PB1_UP2 40 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1852 Gso-Chr2 42601506 42602585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1852 31 168 MAP Kinase Kinase Kinase AT5G57610 42.254 5.54e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1852 - - gmx:102666247 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1555 14 47229333 47230783 Gso2g1852 2 42601506 42602585 GST