Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1850 ATGGTGTTGAGGAAAGTGGGTAAGTATGAGATTGGAAGGACCGTTGGAGAGGGAACGTTTGCGAAGGTAAAGTTCGCTCAGAACACAGAGAGTGGCGAGAGTGTTGCCATGAAGGTGCTAGACCGTAGCGCCATCATCAAGCACAAAATGGTCGACCAGATCAAGAGGGAAATTTCTATCATGAAGCTAGTCAGGCATCCATATGTCGTTCGTCTACACGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATATTGGAGTTTATTACAGGTGGTGAATTGTTTGATAAAATTGTAAGCCATGGGCGTCTTAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTTTTGCCACAGCAAGGGAGTTTATCATAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTTCCAGAACAGGGGGTCAGTTTGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTATAATGGGGCTCCAGCAGATGTTTGGTCCTGTGGAGTTATCCTCTACGTTCTATTGGCTGGATATCTTCCCTTTGACGAACTTGATCTAACTACGTTGTACAGTAAGATTGAGAAAGCACAGTTTTCGTGCCCTCCTTCGTTTCCTGTGGGAGCAAAGTCTTTAATACACACAATGCTGGACCCAAATCCTGAACGTCGTATAACCATTGAGCAGATAAGGAATGATGAGTGGTTTCAAAAGGAATATGTTCCGGTCAGTCTCATCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGATGAGGATCAGAGGACTAACCAGCAATGTGAGAATGACGACATGGGTCCTCTAACTCTTAATGCATTCGACATGATAATTTTATCTCAAGGCTTAAACCTTGCAACCCTATTTGATCGTGGACAGGACTCTATGAAATACGAAACGCGCTTCATCAGTCAAAAGCCACCAAAGGTGATTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACACATATTCGCAACTATAAGATGAGAATAGAGAGTATCTCAACAAATAAGGCTTCTTATTTCTCAGTTATACTAGAAGTCTTTGAAATTGCTCCTACATTTTTCATGGTGGATATTCAGAAAGCAGCTGGAGATGCTGGTGAATATCTCAAGTTTTACAAGAATTTTTCTAGCAATCTTGAGGATATCATGTGGAAACCGCCCCACGAAACAAGCAAATTAAGGAACTCCAAGACCAAAGGGCAGTGA 1335 0.4105 MVLRKVGKYEIGRTVGEGTFAKVKFAQNTESGESVAMKVLDRSAIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVSHGRLSEAESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSAFPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAPADVWSCGVILYVLLAGYLPFDELDLTTLYSKIEKAQFSCPPSFPVGAKSLIHTMLDPNPERRITIEQIRNDEWFQKEYVPVSLIEYEDVNLDDVNAAFDNDEDQRTNQQCENDDMGPLTLNAFDMIILSQGLNLATLFDRGQDSMKYETRFISQKPPKVILSSMEVVAQSMGFKTHIRNYKMRIESISTNKASYFSVILEVFEIAPTFFMVDIQKAAGDAGEYLKFYKNFSSNLEDIMWKPPHETSKLRNSKTKGQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1850 444 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Gso2g1850 444 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1850 444 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Gso2g1850 444 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1850 444 CDD CIPK_C 309 424 - -
Gso2g1850 444 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Gso2g1850 444 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Gso2g1850 444 SUPERFAMILY Protein kinase-like (PK-like) 6 263 IPR011009 -
Gso2g1850 444 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 442 - -
Gso2g1850 444 Pfam NAF domain 305 363 IPR004041 GO:0007165
Gso2g1850 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Gso2g1850 444 PANTHER - 2 442 - -
Gso2g1850 444 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1850 444 Gene3D Kinase associated domain 1, KA1 302 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1850 Gso-Chr2 42585922 42592514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1850 1 388 CBL-interacting serine-threonine protein kinases AT4G24400 80.928 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso2g1850 Pkinase 2.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1850 - - gmx:100816735 889.026