LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso2g1833	ATGCCTCACAGAGCAACTTACTTTTTCCCGAGGCAGTTTCCGGAAAGAGGATTGGATGAATCTTCGAAGCAGAGATTACATCACGAGAAGAGGAAAATCGTCAACTCCATCAAATCACCGGATACTACGACTTTTGCCGCCTTCGAAAGCGACGCGCCGAAAAAGCAAACAGCACCACCACAGAGTCAGAGTCAGAGTCAGAGTCACACACATGATGAGAAAAACGACGTTGTTTTCTCGTCCACTAAGCAAAACGCCGTCTCCGATTTATTCACCGACGGCGACAAGTTCCGAACCCAGCAGAAGCAAATCGCCGCCTTCTGCGACTGGTTGATCGATAAAAAGAAGGATGGCAACCGTCCTAGTCGTCACCATTTCAAACCTTATCCGAAGGAGGAGGAGGATGAACGTGAGCCTCTTCTTCCGCCGGCGGCGGCGCAGGCTGTGAAGGATGCCGTCGACCAGAGCTTCGACCGGCAGGTTTCGCTGCCGCGGCTGTCCAGCGGGAGCAGCCACGCCGGAAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTCACCAAAGACGAAACGTCGTCGTTTTGTCAAGTCTTCGCCGAAGAAGACGCAACGAAGAAACAGCAAGAAGAGGAAGAAAAAGAAAAACGCAACACAGCGCAGAAGTACAAAGAAGGCTACTACCTGCAACTCGCGTTTACGAAGAGGCTATCTTGCTTGGCAAGTCTCGGGTCCGAACCGGTTCTCGCTCTCGACGCTGGCACCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTCTATGGGTGAGTGGGTGCTTATCGTACACGGATAAGATATCGGATGGTTTTTACAACATATTGGGGATGAATCCTTACCTGTGGGTGATGTGCAACGATGTGGAGGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCGGTTGAACCCAGCGACACTTCCATAGAGGTGGTTCTTTTCGATCGGCACGAAGATTATCGGCTTAAGGAGCTTCAGGATAAAGCTCAAGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTAGTGGAGAAGCTCGGAAAACTCGTTGCCATATGCATGGGGGGTACATTCCCGGTGGAGCAAGGAGATCTACACAAGAGGTGGAAGTTGGTGAGTAAGAGATTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTATCTAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCGGATTACATAGGTTTGCCATGTCGAATTGCTCGAGGTTGTCGGTACTGTGCTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGGGAATATGTAGTTGACCTGGTTGGGGAACCTGGAAATATCCATGGGCCGGATTCATCTATTAATGGAGCATATGTGTCTTCAATACCTTCTCCTTTTCAAATTTCTCATTTGAAAGAATGCCAATCGCCATATGTGGATGTTGCAGCATGTTCTCAATCTCTTGGCAGTGTAAGGGAAGATCAACAAGCTGAAGAAATTGATCTGCAGAAAAATAATAATGGCTCTATTTATCCTGCAATAGATCAAACTCATGGAGGTGCAGAACCACCTCTAATTCCTTTTGGCTTGAAAGGGAATGACAAGGAATGTGCGATCCTAGGTTTATTAAATTTTCCTCCAGTATATGAAGGTGTTTCTAAGGATCTTCACCCAGCCACTAAAGCGTCATTACATGAATACCCCAGGCTCAGTAAAGATTCAGTTGTAGTACTAGAAGCTTCCAACAAAGAGATAGAGATCATTGTAAAAGGAAGTTCTGGGGTAAAAAGTAACTATAGGCAATCCACACTGAGCTCATCCAGTCAATCAAAACAGGAACAAGAGCAAGTAAAAATTAAAGTTGAAAATCAGGGTGCTAGTAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAGATACCATGGGATGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCCTTTGGGACAGTGTATCGTGCTGAATGGCATGGATCAGATGTTGCTATCAAGGTTTTAACAGTTCAGGATTTCCAAGATGATCAATTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAACGAGTACGTCATCCAAATGTGGTGTTGTTCATGGGTGCAGTTACTAAACGTCCCCATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTTCGCCTAATACATAAGCCAGCATCTGGTGAGATTCTAGATCCAAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTAAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCAAATCTGTTGGTGGACAGAAATTGGACTGTAAAGGTCTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCTTATCATCAAAATCCGTTGCTGGAACACCTGAGTGGATGGCTCCAGAAATTCTTCGAGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGATTATCCTGTGGGAACTTGTGACTCTGCAACAACCATGGAATGGACTTAATCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAACAGGAGACTTGCTATCCCTCCAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATAACCCTGCTGATCGTCCATCTTTTGGTAGCATAGTTGAATCGTTAAAGAAGCTACTGAAGTCACCAGCAGATGCAATAAAAATGGGTGGGGCAGTAACATAA	2844	0.461	MPHRATYFFPRQFPERGLDESSKQRLHHEKRKIVNSIKSPDTTTFAAFESDAPKKQTAPPQSQSQSQSHTHDEKNDVVFSSTKQNAVSDLFTDGDKFRTQQKQIAAFCDWLIDKKKDGNRPSRHHFKPYPKEEEDEREPLLPPAAAQAVKDAVDQSFDRQVSLPRLSSGSSHAGSLFTLDGTATFSSDVTKDETSSFCQVFAEEDATKKQQEEEEKEKRNTAQKYKEGYYLQLAFTKRLSCLASLGSEPVLALDAGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSDTSIEVVLFDRHEDYRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHRSSCLVKIKDDRQLSREYVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLKECQSPYVDVAACSQSLGSVREDQQAEEIDLQKNNNGSIYPAIDQTHGGAEPPLIPFGLKGNDKECAILGLLNFPPVYEGVSKDLHPATKASLHEYPRLSKDSVVVLEASNKEIEIIVKGSSGVKSNYRQSTLSSSSQSKQEQEQVKIKVENQGASNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAIKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEILRGEPSNEKSDVYSFGIILWELVTLQQPWNGLNHAQVVGAVAFQNRRLAIPPNISPALASLMESCWADNPADRPSFGSIVESLKKLLKSPADAIKMGGAVT*	948

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso2g1833	947	CDD	STKc_MAP3K-like	681	929	-	-
	Gso2g1833	947	ProSitePatterns	Protein kinases ATP-binding region signature.	681	702	IPR017441	GO:0005524
	Gso2g1833	947	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	796	808	IPR008271	GO:0004672\|GO:0006468
	Gso2g1833	947	SUPERFAMILY	Protein kinase-like (PK-like)	651	928	IPR011009	-
	Gso2g1833	947	MobiDBLite	consensus disorder prediction	118	138	-	-
	Gso2g1833	947	Pfam	Ethylene-responsive protein kinase Le-CTR1	262	471	-	-
	Gso2g1833	947	Coils	Coil	208	228	-	-
	Gso2g1833	947	Gene3D	Phosphorylase Kinase; domain 1	668	752	-	-
	Gso2g1833	947	MobiDBLite	consensus disorder prediction	37	68	-	-
	Gso2g1833	947	Gene3D	Transferase(Phosphotransferase) domain 1	754	941	-	-

Showing 1 to 10 of 21 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso2g1833	Gso-Chr2	42261957	42269332	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso2g1833	1	944	MAP Kinase Kinase Kinase	AT4G24480	54.757	0.0	1013

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-2	Gso2g1833		PK_Tyr_Ser-Thr	2.5e-65	CL0016

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso2g1833	-		-	gmx:100786546	1689.86

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso14g1544	14	46976607	46983807	Gso2g1833	2	42261957	42269332	GST
	Gso2g1833	2	42261957	42269332	Gso4g0816	4	8466865	8474669	PCT

Showing 1 to 2 of 2 entries