Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1833 ATGCCTCACAGAGCAACTTACTTTTTCCCGAGGCAGTTTCCGGAAAGAGGATTGGATGAATCTTCGAAGCAGAGATTACATCACGAGAAGAGGAAAATCGTCAACTCCATCAAATCACCGGATACTACGACTTTTGCCGCCTTCGAAAGCGACGCGCCGAAAAAGCAAACAGCACCACCACAGAGTCAGAGTCAGAGTCAGAGTCACACACATGATGAGAAAAACGACGTTGTTTTCTCGTCCACTAAGCAAAACGCCGTCTCCGATTTATTCACCGACGGCGACAAGTTCCGAACCCAGCAGAAGCAAATCGCCGCCTTCTGCGACTGGTTGATCGATAAAAAGAAGGATGGCAACCGTCCTAGTCGTCACCATTTCAAACCTTATCCGAAGGAGGAGGAGGATGAACGTGAGCCTCTTCTTCCGCCGGCGGCGGCGCAGGCTGTGAAGGATGCCGTCGACCAGAGCTTCGACCGGCAGGTTTCGCTGCCGCGGCTGTCCAGCGGGAGCAGCCACGCCGGAAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTCACCAAAGACGAAACGTCGTCGTTTTGTCAAGTCTTCGCCGAAGAAGACGCAACGAAGAAACAGCAAGAAGAGGAAGAAAAAGAAAAACGCAACACAGCGCAGAAGTACAAAGAAGGCTACTACCTGCAACTCGCGTTTACGAAGAGGCTATCTTGCTTGGCAAGTCTCGGGTCCGAACCGGTTCTCGCTCTCGACGCTGGCACCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTCTATGGGTGAGTGGGTGCTTATCGTACACGGATAAGATATCGGATGGTTTTTACAACATATTGGGGATGAATCCTTACCTGTGGGTGATGTGCAACGATGTGGAGGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCGGTTGAACCCAGCGACACTTCCATAGAGGTGGTTCTTTTCGATCGGCACGAAGATTATCGGCTTAAGGAGCTTCAGGATAAAGCTCAAGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTAGTGGAGAAGCTCGGAAAACTCGTTGCCATATGCATGGGGGGTACATTCCCGGTGGAGCAAGGAGATCTACACAAGAGGTGGAAGTTGGTGAGTAAGAGATTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTATCTAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCGGATTACATAGGTTTGCCATGTCGAATTGCTCGAGGTTGTCGGTACTGTGCTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGGGAATATGTAGTTGACCTGGTTGGGGAACCTGGAAATATCCATGGGCCGGATTCATCTATTAATGGAGCATATGTGTCTTCAATACCTTCTCCTTTTCAAATTTCTCATTTGAAAGAATGCCAATCGCCATATGTGGATGTTGCAGCATGTTCTCAATCTCTTGGCAGTGTAAGGGAAGATCAACAAGCTGAAGAAATTGATCTGCAGAAAAATAATAATGGCTCTATTTATCCTGCAATAGATCAAACTCATGGAGGTGCAGAACCACCTCTAATTCCTTTTGGCTTGAAAGGGAATGACAAGGAATGTGCGATCCTAGGTTTATTAAATTTTCCTCCAGTATATGAAGGTGTTTCTAAGGATCTTCACCCAGCCACTAAAGCGTCATTACATGAATACCCCAGGCTCAGTAAAGATTCAGTTGTAGTACTAGAAGCTTCCAACAAAGAGATAGAGATCATTGTAAAAGGAAGTTCTGGGGTAAAAAGTAACTATAGGCAATCCACACTGAGCTCATCCAGTCAATCAAAACAGGAACAAGAGCAAGTAAAAATTAAAGTTGAAAATCAGGGTGCTAGTAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAGATACCATGGGATGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCCTTTGGGACAGTGTATCGTGCTGAATGGCATGGATCAGATGTTGCTATCAAGGTTTTAACAGTTCAGGATTTCCAAGATGATCAATTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAACGAGTACGTCATCCAAATGTGGTGTTGTTCATGGGTGCAGTTACTAAACGTCCCCATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTTCGCCTAATACATAAGCCAGCATCTGGTGAGATTCTAGATCCAAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTAAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCAAATCTGTTGGTGGACAGAAATTGGACTGTAAAGGTCTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCTTATCATCAAAATCCGTTGCTGGAACACCTGAGTGGATGGCTCCAGAAATTCTTCGAGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGATTATCCTGTGGGAACTTGTGACTCTGCAACAACCATGGAATGGACTTAATCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAACAGGAGACTTGCTATCCCTCCAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATAACCCTGCTGATCGTCCATCTTTTGGTAGCATAGTTGAATCGTTAAAGAAGCTACTGAAGTCACCAGCAGATGCAATAAAAATGGGTGGGGCAGTAACATAA 2844 0.461 MPHRATYFFPRQFPERGLDESSKQRLHHEKRKIVNSIKSPDTTTFAAFESDAPKKQTAPPQSQSQSQSHTHDEKNDVVFSSTKQNAVSDLFTDGDKFRTQQKQIAAFCDWLIDKKKDGNRPSRHHFKPYPKEEEDEREPLLPPAAAQAVKDAVDQSFDRQVSLPRLSSGSSHAGSLFTLDGTATFSSDVTKDETSSFCQVFAEEDATKKQQEEEEKEKRNTAQKYKEGYYLQLAFTKRLSCLASLGSEPVLALDAGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSDTSIEVVLFDRHEDYRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHRSSCLVKIKDDRQLSREYVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLKECQSPYVDVAACSQSLGSVREDQQAEEIDLQKNNNGSIYPAIDQTHGGAEPPLIPFGLKGNDKECAILGLLNFPPVYEGVSKDLHPATKASLHEYPRLSKDSVVVLEASNKEIEIIVKGSSGVKSNYRQSTLSSSSQSKQEQEQVKIKVENQGASNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAIKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEILRGEPSNEKSDVYSFGIILWELVTLQQPWNGLNHAQVVGAVAFQNRRLAIPPNISPALASLMESCWADNPADRPSFGSIVESLKKLLKSPADAIKMGGAVT* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1833 947 CDD STKc_MAP3K-like 681 929 - -
Gso2g1833 947 ProSitePatterns Protein kinases ATP-binding region signature. 681 702 IPR017441 GO:0005524
Gso2g1833 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Gso2g1833 947 SUPERFAMILY Protein kinase-like (PK-like) 651 928 IPR011009 -
Gso2g1833 947 MobiDBLite consensus disorder prediction 118 138 - -
Gso2g1833 947 Pfam Ethylene-responsive protein kinase Le-CTR1 262 471 - -
Gso2g1833 947 Coils Coil 208 228 - -
Gso2g1833 947 Gene3D Phosphorylase Kinase; domain 1 668 752 - -
Gso2g1833 947 MobiDBLite consensus disorder prediction 37 68 - -
Gso2g1833 947 Gene3D Transferase(Phosphotransferase) domain 1 754 941 - -
Gso2g1833 947 MobiDBLite consensus disorder prediction 1 76 - -
Gso2g1833 947 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 143 943 - -
Gso2g1833 947 SMART serkin_6 675 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1833 947 Pfam Protein tyrosine and serine/threonine kinase 675 929 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PRINTS Tyrosine kinase catalytic domain signature 749 762 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PRINTS Tyrosine kinase catalytic domain signature 790 808 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PRINTS Tyrosine kinase catalytic domain signature 837 847 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Gso2g1833 947 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 143 943 - -
Gso2g1833 947 ProSiteProfiles Protein kinase domain profile. 675 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1833 Gso-Chr2 42261957 42269332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1833 1 944 MAP Kinase Kinase Kinase AT4G24480 54.757 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gso2g1833 PK_Tyr_Ser-Thr 2.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1833 - - gmx:100786546 1689.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1544 14 46976607 46983807 Gso2g1833 2 42261957 42269332 GST
Gso2g1833 2 42261957 42269332 Gso4g0816 4 8466865 8474669 PCT