Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1817 ATGTTCTCAAAGCTTCAGCCACAACACCAGCAACAGCATCAACCTTTTCAATTCTCTCGTGAATGTCAAACGTCCGAGGACGATGACAGCCGAAGCAGCGGTGGCCCTAACACCGCCGTCGCCCAAAAATCAGTTTTAGGCGGCGGAGGATGCAGCGATGGGGCCACAATTGAAGTGGTGCGGCGGCCCAGGGGCCGCCCGCCCGGGTCCAAGAACAGGCCCAAGCCGCCTCTCATAATAACGCGCGAGCCCGAGCCCGCCATGAGCCCGTTCATTCTAGAAATCCCGGGCGGAAGCGACGTCGTCGAAGCCCTAGCCCGGTTCAGCCGCAGAAAAAACACTGGCCTGTGCGTGTTAACCGGTTCGGGAACCGTCGCCAACGTCACTCTCCGTCAACCTTCTTTCTCTCCCGCCGGCGCCACCGTCGCCACCGTCACTTTCCACGGCCGCTTCGATATCCTCTCCATGTCCGCCACCTTCCTCCACCACGCCTCCCCGGCGGCGATCCCGAACGCCTTCGCCGTGTCCCTTTCCGGACCGCAGGGGCAGATCGTCGGCGGATTCGTCGCCGGCAGGCTCCTCGCGGCCGGCACGGTGTTCGTGATTGCCGCGTCGTTCAACAATCCGTCGTATCACCGGCTTTCGTCGGAGGAGGAGGCGCAGAACAACTCTGGCGGCGGCGCAGGAGACGCGCAGTCTCCGCCGGTTTCCGGTGGCGGCGTGGAGAGCGGACACGTTCCGGCTGAGTCGTTTATGTACAGCTGTCACCTTTCTTCGGATGTGATTTGGGCTCCAACCCCTAGACCACCTTTCTGA 816 0.6225 MFSKLQPQHQQQHQPFQFSRECQTSEDDDSRSSGGPNTAVAQKSVLGGGGCSDGATIEVVRRPRGRPPGSKNRPKPPLIITREPEPAMSPFILEIPGGSDVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFSPAGATVATVTFHGRFDILSMSATFLHHASPAAIPNAFAVSLSGPQGQIVGGFVAGRLLAAGTVFVIAASFNNPSYHRLSSEEEAQNNSGGGAGDAQSPPVSGGGVESGHVPAESFMYSCHLSSDVIWAPTPRPPF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1817 271 MobiDBLite consensus disorder prediction 213 244 - -
Gso2g1817 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 219 - -
Gso2g1817 271 PIRSF ESCAROLA 1 259 IPR014476 GO:0003680
Gso2g1817 271 CDD DUF296 90 206 IPR005175 -
Gso2g1817 271 MobiDBLite consensus disorder prediction 1 84 - -
Gso2g1817 271 Gene3D - 89 224 - -
Gso2g1817 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 208 IPR005175 -
Gso2g1817 271 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g1817 271 MobiDBLite consensus disorder prediction 213 230 - -
Gso2g1817 271 ProSiteProfiles PPC domain profile profile. 85 227 IPR005175 -
Gso2g1817 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 269 IPR014476 GO:0003680
Gso2g1817 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 8 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1817 Gso-Chr2 42084478 42085750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1817 53 270 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.882 1.20e-93 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1531 14 46810312 46811505 Gso2g1817 2 42084478 42085750 GST
Gso2g1817 2 42084478 42085750 Gso4g1868 4 48942579 48944253 PCT