Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1809 ATGGCACCCAGTTTTGATTGTGTTTCGAGCCTTCTCTGTGTGGAAGACAACAGTATTTTTGACGAAAACGATTATGGTGGTTCGGTGGAGGTGTTGGAGGACGCGTGGCAGGATCCTAGATATCGTCGAAACCTTAGTCAAAGTGAGAACTTGGATGTCCCAAATGGGTGGTTTCAGTTGCAGAGTGATGAGTGTTTGAGACTGATGGTTGAAAAGGAATGGGATCACTTGCCTAATGGTGATTATAGGAATAAGCTGAGGAGTGGGGATTTGGACTTTGAGGCCAGAAAAGAGGCCATTGATTGGATTCAAAAGGTTCAAGAGCACTTTGGTTTTGGACCTGTCTGTGCATATCTATCCATAAACTACTTGGACCGCTTCCTTTCTGCATATGAATTACCAAAGCATAGAACTTGGACAATGCAATTGTTGGCTGTTGGATGCTTATCTCTGGCAGCCAAAATGGAAGAGACTGATGCTCCTATGTCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCCAAAACAATACAGAGAATGGAGCTTCTGGTGCTGAGCACATTGAGGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACCATTTCCTTTACAAGATCAATGATGATCAAAGTCCAATTGGAGCTTCAATTTTGCAATCCATCCAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGCAGCTGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTGCAAACTGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTGGAAAAGGAGAGGGTATTGAAGTGTGTTAAATTGATCCAAGAGCTGGCATCAAATAGTGGTGGTGGTTCTGCCAAGGGTGATAGTGCTTCTGTTTCTGTCCCTAGCGTGCCCCAGAGCCCAATAGGGGTGTTGAACACTGAATGCTTCAGCTACAAAAGTGATGACACAAATGCTGCTTCATGTGCAAATACTTCACATAACAATAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTTTGGAGAATAG 1074 0.4348 MAPSFDCVSSLLCVEDNSIFDENDYGGSVEVLEDAWQDPRYRRNLSQSENLDVPNGWFQLQSDECLRLMVEKEWDHLPNGDYRNKLRSGDLDFEARKEAIDWIQKVQEHFGFGPVCAYLSINYLDRFLSAYELPKHRTWTMQLLAVGCLSLAAKMEETDAPMSLDLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVQTEKAISVLIQLVEKERVLKCVKLIQELASNSGGGSAKGDSASVSVPSVPQSPIGVLNTECFSYKSDDTNAASCANTSHNNSPDAKRRKLNKTFGE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1809 357 SUPERFAMILY Cyclin-like 57 195 IPR036915 -
Gso2g1809 357 CDD CYCLIN 96 188 IPR013763 -
Gso2g1809 357 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 351 - -
Gso2g1809 357 Gene3D - 67 284 - -
Gso2g1809 357 Pfam Cyclin, C-terminal domain 198 295 IPR004367 -
Gso2g1809 357 Gene3D - 79 196 - -
Gso2g1809 357 MobiDBLite consensus disorder prediction 343 357 - -
Gso2g1809 357 SMART Cyclin_C_2 198 324 IPR004367 -
Gso2g1809 357 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Gso2g1809 357 SUPERFAMILY Cyclin-like 180 290 IPR036915 -
Gso2g1809 357 SMART cyclin_7 101 189 IPR013763 -
Gso2g1809 357 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Gso2g1809 357 PANTHER CYCLINS 1 351 IPR039361 -
Gso2g1809 357 MobiDBLite consensus disorder prediction 333 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1809 Gso-Chr2 41932191 41935113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1809 66 336 Core Cell Cycle Gene Families AT2G22490 50.545 8.29e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1809 K18810 - gmx:100812660 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1520 14 46666472 46669470 Gso2g1809 2 41932191 41935113 GST