Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1806 ATGCGCTACCTCACTTGCAACGCCGAGTCCGCAATAGCCACATGCGACCCTCACTCCCTCAAGAAGAAGAAAAAGCCCAAAAGTCCAGCCCATGCCCAGCCCGTGCGACACTTCGCCTACTCCGACATCCTCGACGCCACCAACAACTTCTCTGCCGACACCTTCCTAGGTAAAGGCAGCCACGGCACCGTCTACAAGGCCGCCTTCCACGGCGGCGCCCTCGTCGCCGCCGTCAAAATAACCAAACCCAAAACCTCAAACGAAATCGAAATTCTCTCCCACCTCAAAAAAAACCCTCGTCTTGTTAACCTAATTGGCTTCTGCAACGACCAAACCCAAACTAACAACATTAACAACAACAAACTCATTGTTGTCGAGTACATGCCAAACGGTTCGCTCCACGAGCTTCTCCACTCGACTAAAAAACCGGTTCGACCCCCAAGCTGGACCGCGCGAGTCCGGTTTGCGGTTCAGGTCGCGAAAGCGGTTCGCCTTTTACACTCTTCCGAACCGCCAGTTATTCACAGGGACATAAAATCGTCCAATGTGTTAATCGACGAAAAGTGGAACGCTAGACTCGGTGACTTCGGGCTCGCGGTGAGGGGACACGTGGCGGATTCTCGCGTGCCACCGGCGGGGACGTTAGGATACCTCGACCCGTGCTATCTTGCGCCGGGAGATCTAAGTTCCAAGAGCGATGTCTTCAGTTTCGGAGTTTTGCTGCTCGAGATCGCGAGTGGGAGGCACGCGCTCGACGTGAGGCACAGTCCGCCGTCGGTGCTGGACTGGGCGGTGCCGCTGGTCCGGCGCGGCGAGTTTAAGGAGATTTGTGACCCGAGAATTGGAGCACCGCCGGACATGGCGGCGTTCCGGCGGATGGCGGTGCTGGCGGCGAGGTGCGTGAGGAGCACCCCGGAGAGAAGGCCGTCGATGGTGGAGGTGTTGGAGTGTCTAACGGCGGTGAGAAAATGTTTTCGCGCGCCGGTAATGTGGAAGAGGATTAAGAGGCGCGTGGAGATAGCGCGTGGGGATTTGTTTCATGATTGGGACAGGAGTGAGGAAGTTGTGAGAGTAGTTAAGTTAGGAAGTAGTAGTAGTAGTAGAAGGAACGGGAAAGTATCTAGTGTGTCGGGTGTAGAGTATGAGGGTGGACACGCGAATCCAGCGGTGAGATCTAGATCGGTTGGTTCGGGTTCGGGTTTGGTTGGGTTTGGGTTCAAGAATAGAAAAGGGAAAGTGAGGCTAAAGAGATCGAGGTCTATGGGGAGTCCGGTGCCTCTCCGGTGGTGA 1290 0.5566 MRYLTCNAESAIATCDPHSLKKKKKPKSPAHAQPVRHFAYSDILDATNNFSADTFLGKGSHGTVYKAAFHGGALVAAVKITKPKTSNEIEILSHLKKNPRLVNLIGFCNDQTQTNNINNNKLIVVEYMPNGSLHELLHSTKKPVRPPSWTARVRFAVQVAKAVRLLHSSEPPVIHRDIKSSNVLIDEKWNARLGDFGLAVRGHVADSRVPPAGTLGYLDPCYLAPGDLSSKSDVFSFGVLLLEIASGRHALDVRHSPPSVLDWAVPLVRRGEFKEICDPRIGAPPDMAAFRRMAVLAARCVRSTPERRPSMVEVLECLTAVRKCFRAPVMWKRIKRRVEIARGDLFHDWDRSEEVVRVVKLGSSSSSRRNGKVSSVSGVEYEGGHANPAVRSRSVGSGSGLVGFGFKNRKGKVRLKRSRSMGSPVPLRW* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1806 429 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Gso2g1806 429 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Gso2g1806 429 SUPERFAMILY Protein kinase-like (PK-like) 33 335 IPR011009 -
Gso2g1806 429 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 356 - -
Gso2g1806 429 PANTHER OS01G0253100 PROTEIN 1 356 IPR045271 GO:0004714|GO:0006468
Gso2g1806 429 Pfam Protein kinase domain 53 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1806 429 SMART serkin_6 50 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1806 429 Gene3D Phosphorylase Kinase; domain 1 11 127 - -
Gso2g1806 429 ProSiteProfiles Protein kinase domain profile. 50 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1806 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1806 Gso-Chr2 41867327 41869104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1806 36 318 Receptor kinase-like Gene Family AT3G59420 42.424 1.62e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso2g1806 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1806 - - gmx:100811580 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1806 2 41867327 41869104 Gso4g0793 4 8182291 8184206 PCT
Gso2g1806 2 41867327 41869104 Gso6g0798 6 7548254 7550231 PCT
Gso4g0793 4 8182291 8184206 Gso2g1806 2 41867327 41869104 PCT
Gso6g0798 6 7548254 7550231 Gso2g1806 2 41867327 41869104 PCT