Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1801 ATGGTCGCCAATTCCCACAGAGTGGGTTCTTCCTACGGTGGCGCTGCCCCTTACCGATCAAGAGATGGGCTTAGCCCCCGACCCGTTGGTGCCTCAGAGGAGATCCAATTACGAATTGATCCCTTGGACTTGGACGATGAGATCACTGGTCTTCATCGCCAAGTTAGAAGATTGAAACATGTTGCTGAGGAGATAGGAACAGAAGTGAAGTATCAGAAAAATTTTCTTGAAGAACTGCAAATGACAATGATAAAGGCTCAAGCTGGAGTAAAAAATAACTTGAGAAGATTGAACAAGAGCATCATCCAAAGTGGTTCAAACCATATTATTCATGTCATTCTTTTTGCGTTAGTTTGTTTCTTTGTAGTGTACCTTTGGTCCAAGATGATCAGAAAGTGA 399 0.4286 MVANSHRVGSSYGGAAPYRSRDGLSPRPVGASEEIQLRIDPLDLDDEITGLHRQVRRLKHVAEEIGTEVKYQKNFLEELQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIIHVILFALVCFFVVYLWSKMIRK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1801 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 45 100 IPR000727 -
Gso2g1801 132 Gene3D - 45 107 - -
Gso2g1801 132 CDD SNARE_Qc 43 99 - -
Gso2g1801 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Gso2g1801 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Gso2g1801 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
Gso2g1801 132 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1801 Gso-Chr2 41796447 41799506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1801 K08505 - gmx:100500358 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1510 14 46425582 46429667 Gso2g1801 2 41796447 41799506 GST
Gso2g1801 2 41796447 41799506 Gso6g1170 6 11398592 11399614 PCT
Gso6g1170 6 11398592 11399614 Gso2g1801 2 41796447 41799506 PCT