Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1794 ATGAACATGCATAAGGAGAGTCCTCTTATCAAACTCCACAGTTTCGACCAAGGCCATGCATGGCTGGCTCTATTGCACCTTCTCATTCACGTCTCACCGGCAGTAACCGGTCAACCGGTAACCCCGCCGGTGCAACCCGACAGCAACAAATCCATGGTCACAATCATGGCCATTTTGGCCATCATGTTTCTCATCTTAGTCTTCCTCTCCATTTACTCCCGCAAGTGCTACGACCGGCAGGCCCCGACACGTGGCATCCTCGACCGCGCGGACCCCACCGGCGCAGCCGGTAACCCGTCGCAAGCTGAATCCAATGGCCTCAACCAAGCCACAATAGAAACGTTCCCAAGTTTCCTCTACGGCGACGTGAAGGGTCTGAAAATCGGAAAAGACACGCTTGCATGCGCGGTTTGCTTGAACGAGTTCGAAGACGACGAGACCCTCCGCATGATCCCCAAATGCTGCCACGTGTACCACCGCTATTGCATTGATGAGTGGTTAGGTTCTCACTCCACGTGCCCGGTGTGTCGCGCCAACCTCGTTCCACAACCAGAAGACGTAAACATCAACACGAATATCCCTTCAATCCTGTCAATTCAGATACCCGATGAACACGAACATGAATATGAATACGAGACTGTTGTTGTTGGTGAGGAACATAAGAGAGGTAATGACGTGGAATCACCGAAGGTGGATTTGCTTCGGAGGATTCGCTCGTTGAATCATCAGAGCCGTCCATCGAGGTCGAGGTCGACGGGGTTCTTGTCTTCGCTTTTGTTTTCGAGATCAAACTCGTTGGGGCAAATGCAATTGGCGCATAATGCCGCTGGAGAGAATTATGAGAGGTTTACGCTAAGGTTACCCGAGGAGGTACGGAGCCAGATGATGCTGCAGCGTGCGAATAGCTGCGTGTGCTTTACGAGGATGAGCAGTGGCACGTGGGGGTATAGGACGACGAGAAGCGCGGGGAGAGGGTGTGTACAGTACGAGAGATTTGGTGGTGGTGATGATGAACGGTGGGGTTTCACTTTGACTCCACCGAGTCTCATTAGGAACGGTTGGAATAATAATAGATCAACGAGAAAATCACAGCGTTCGGGTCTGGTGTTGGATAATAATAATGCTGATGAGAAATCCTCTGAATTCTTGCCTCTTGGGTAG 1161 0.5142 MNMHKESPLIKLHSFDQGHAWLALLHLLIHVSPAVTGQPVTPPVQPDSNKSMVTIMAILAIMFLILVFLSIYSRKCYDRQAPTRGILDRADPTGAAGNPSQAESNGLNQATIETFPSFLYGDVKGLKIGKDTLACAVCLNEFEDDETLRMIPKCCHVYHRYCIDEWLGSHSTCPVCRANLVPQPEDVNINTNIPSILSIQIPDEHEHEYEYETVVVGEEHKRGNDVESPKVDLLRRIRSLNHQSRPSRSRSTGFLSSLLFSRSNSLGQMQLAHNAAGENYERFTLRLPEEVRSQMMLQRANSCVCFTRMSSGTWGYRTTRSAGRGCVQYERFGGGDDERWGFTLTPPSLIRNGWNNNRSTRKSQRSGLVLDNNNADEKSSEFLPLG* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1794 386 CDD RING-H2_EL5_like 135 177 - -
Gso2g1794 386 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Gso2g1794 386 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 324 - -
Gso2g1794 386 SUPERFAMILY RING/U-box 131 188 - -
Gso2g1794 386 PANTHER RING FINGER DOMAIN-CONTAINING 1 324 - -
Gso2g1794 386 MobiDBLite consensus disorder prediction 353 373 - -
Gso2g1794 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 182 IPR013083 -
Gso2g1794 386 SMART ring_2 135 176 IPR001841 -
Gso2g1794 386 Pfam Ring finger domain 134 177 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1794 Gso-Chr2 41702460 41704229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1794 51 352 Rapid Response to Elicitors AT3G05200 37.987 3.55e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1794 K10664 - gmx:100807292 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1498 14 46249918 46251666 Gso2g1794 2 41702460 41704229 GST