Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1780 ATGGCAGCGAGCGCTCCCACTCCACGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAGGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCTCCGCCGAGAGCGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTAATCGGCGCTCGCCGCGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCGCCGTCATCCGTGACTACCGCTCCAAGATCGAGGCCGAGCTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTCGACACGCGCCTCGTCCCCTCCGCCGCCTCCGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGAGACTACCACAGGTACCTCGCTGAGTTCAAGACCGGCGCCGACCGCAAGGAAGCCGCCGAGAGCACGCTCTCCGCCTACAAAGCCGCTCAGGACATTGCTAACACCGAGCTGCCTCCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGTGCATGCAGCCTTGCAAAACAGGCTTTTGATGAGGCTATTGCTGAATTGGATACGTTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATTAAAGAAGCCGCACCCAAAGGTGACGGGGAACAAAATTAA 789 0.5678 MAASAPTPREEFVYMAKLAEQAERYEEMVEFMEKVSASAESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIEAELSNICDGILKLLDTRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKAAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGDGEQN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1780 262 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Gso2g1780 262 Gene3D - 1 252 IPR036815 -
Gso2g1780 262 SUPERFAMILY 14-3-3 protein 9 241 IPR036815 -
Gso2g1780 262 SMART 1433_4 9 252 IPR023410 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Gso2g1780 262 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Gso2g1780 262 Pfam 14-3-3 protein 15 239 IPR023410 -
Gso2g1780 262 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 7 255 - -
Gso2g1780 262 PIRSF 14-3-3 3 251 IPR000308 -
Gso2g1780 262 PANTHER 14-3-3 PROTEIN 7 255 IPR000308 -
Gso2g1780 262 Coils Coil 15 42 - -
Gso2g1780 262 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1780 Gso-Chr2 41510585 41512937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1780 9 262 14-3-3 family AT1G78300 88.627 3.88e-168 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1780 K06630 - gmx:100798989 512.301