Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1757 ATGATGTGTTTGTTTAGAATCTTTAGATCAATAGTGCTTCTATTTTTCTTTCTGGGCACTGTTCAGTCTAGAGTACTTCATGGGAAAGAAAATGCTGGCATCGTCAATGGAAAAAATTCACTTATTTCATTCATGTCAGGCATTGTTTCTGACCCTCAAAACGCTCTAAAGAGTTGGAAGTCACCGGGTGTTCATGTTTGTGATTGGTCAGGTGTAAGATGCAACAATGCAAGTGACATGATAATTGAGCTTGATCTCAGTGGAGGGTCACTAGGAGGCACCATTTCCCCTGCTCTTGCTAACATATCTTCCTTGCAAATTCTTGACCTTTCTGGCAACTATTTTGTGGGTCACATTCCAAAGGAACTAGGCTATTTGGTTCAGCTTGGACAACTCAGTTTGTCTGGGAATTTTCTTCAAGGGCACATTCCATCCGAGTTTGGTTCACTTCACAACTTGTACTACCTTAACTTGGGAAGCAATCATCTTGAGGGAGAGATTCCCCCATCACTTTTCTGTAATGGAACTTCACTGAGTTATGTAGACCTCTCTAACAATTCCTTAGGGGGAGAAATCCCCTTGAACAAAGAGTGTATCCTTAAAGACCTCAGGTTCCTATTACTTTGGTCTAACAAGCTTGTAGGCCAAGTTCCTTTAGCTCTTGCATACTCTACCAAGCTTAAATGGCTTGATTTGGAGTTGAATATGTTGAGTGGAGAGCTTCCTTTTAAGATTGTAAGTAATTGGCCACAACTACAGTTCCTCTACTTGTCATACAACAATTTTACCAGCCATGATGGTAATACCAACCTTGAACCTTTCTTTGCCTCCTTGGTGAATTTATCACACTTTCAAGAACTCGAATTGGCAGGAAACAATCTTGGTGGGAAGCTGCCTCATAACATTGGTGATCTTCCCACCAGCCTGCAACAACTTCACCTAGAAAAAAATCTAATATATGGCTCTATACCTCCACAAATTGGCAACCTTGTCAACCTGACTTTCTTGAAGTTGTCCAGTAACCTATTAAATGGATCTATCCCTCCCAGCCTCGGTCACATGAATAGGCTAGAGAGAATTTATTTGTCAAATAATTCACTATCTGGTGATATTCCATCAATCCTTGGTGATATAAAGCATCTGGGACTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTCCAATACCAGATAGTTTTGCAAATCTCTCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATTCCACTAAGTCTGGGAAAATGTGTTAATTTGGAGATTTTAGACTTATCTCACAACAAGATAACAGGTTTGATTCCTGCAGAAGTAGCTGCCTTGGATAGCTTGAAATTATACCTAAATTTGTCAAACAATAACTTACATGGGTCTTTACCATTGGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATGTATCCATGAATAACCTCTCTGGCAGCGTCCCTCCACAACTAGAAAGTTGCACAGCACTGGAGTATCTCAACCTCTCTGGTAATTCCTTTGAAGGCCCTCTCCCTTATTCATTAGGAAAATTGCTCTATATTCGAGCACTTGACGTGTCTTCAAATCAATTGACTGGGAAAATACCAGAGTCCATGCAGTTGTCTTCCTCTCTCAAGGAACTTAACTTCTCTTTCAACAAATTCTCAGGGAGAGTCTCACACAAGGGAGCATTTTCAAATCTTACCATTGACTCTTTCCTAGGAAATGATGGTCTCTGTGGCCGGTTTAAAGGCATGCAACATTGTCACAAGAAACGTGGTTATCATTTGGTGTTCTTGTTGATTCCTGTGTTACTATTTGGCACCCCTCTCCTATGCATGCTTTTTAGGTACTCCATGGTAACGATCAAGTCAAAAGTGAGAAATCGAATTGCTGTCGTTAGAAGAGGTGATTTGGAGGATGTAGAAGAGGGAACAGAAGACCACAAGTACCCAAGAATTTCATATAAACAACTTAGAGAGGCCACTGGAGGCTTCAGTGCTTCAAGCTTAATTGGTTCAGGCCGGTTTGGACAAGTCTACGAAGGAATGCTACAAGATAATACAAGAGTAGCTGTGAAGGTGTTGGATACAACGCATGGTGAGATTTCAAGGAGCTTTAGAAGGGAATATCAAATTCTGAAAAAGATAAGGCACAGAAATTTAATAAGAATCATCACAATTTGCTGTAGGCCAGAATTTAATGCCCTTGTTTTTCCCTTGATGCCAAATGGTAGCCTTGAGAAGTACCTATATCCAAGCCAAAGGTTGGATGTGGTTCAATTGGTAAGAATCTGCAGTGATGTAGCCGAGGGAATGTCCTATCTGCACCATTACTCTCCAGTGAAAGTAGTGCATTGTGATCTTAAGCCAAGCAATATACTCCTTGATGAAGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTGTACAAAGTGATGAGAATACATCCATCAATGAATCAGCATCTTTCAGTTCAACACATGGTTTGTTATGTGGCTCAGTTGGTTATATAGCTCCTGAATACGGAATGGGAAAACATGCTTCAACTGAGGGTGATGTTTACAGTTTTGGAGTACTTGTGTTGGAGATGGTCTCAGGTAGACGCCCCACAGATGTACTCAGCCATGAAGGCTCAAGCTTGTGTGAGTGGATTAAAAAGCAATACACACACCAACACCAACTTGAAAACTTTGTTGAACAAGCACTGCAAAGGTTCTCTCCTTGTGGCGTGCCAAACCATCGTAACAAAATTTGGAAAGATGTTATACTAGAACTCATTGAGCTGGGGCTAGTATGCACACAGTACAATCCTTCAACAAGACCAAGCATGCACGATATAGCTCAAGAGATGGAGAGATTGAAGGACTACCTCACTAAGTCAAACTTGCCCCCTCATTAA 2925 0.4089 MMCLFRIFRSIVLLFFFLGTVQSRVLHGKENAGIVNGKNSLISFMSGIVSDPQNALKSWKSPGVHVCDWSGVRCNNASDMIIELDLSGGSLGGTISPALANISSLQILDLSGNYFVGHIPKELGYLVQLGQLSLSGNFLQGHIPSEFGSLHNLYYLNLGSNHLEGEIPPSLFCNGTSLSYVDLSNNSLGGEIPLNKECILKDLRFLLLWSNKLVGQVPLALAYSTKLKWLDLELNMLSGELPFKIVSNWPQLQFLYLSYNNFTSHDGNTNLEPFFASLVNLSHFQELELAGNNLGGKLPHNIGDLPTSLQQLHLEKNLIYGSIPPQIGNLVNLTFLKLSSNLLNGSIPPSLGHMNRLERIYLSNNSLSGDIPSILGDIKHLGLLDLSRNKLSGPIPDSFANLSQLRRLLLYDNQLSGTIPLSLGKCVNLEILDLSHNKITGLIPAEVAALDSLKLYLNLSNNNLHGSLPLELSKMDMVLAIDVSMNNLSGSVPPQLESCTALEYLNLSGNSFEGPLPYSLGKLLYIRALDVSSNQLTGKIPESMQLSSSLKELNFSFNKFSGRVSHKGAFSNLTIDSFLGNDGLCGRFKGMQHCHKKRGYHLVFLLIPVLLFGTPLLCMLFRYSMVTIKSKVRNRIAVVRRGDLEDVEEGTEDHKYPRISYKQLREATGGFSASSLIGSGRFGQVYEGMLQDNTRVAVKVLDTTHGEISRSFRREYQILKKIRHRNLIRIITICCRPEFNALVFPLMPNGSLEKYLYPSQRLDVVQLVRICSDVAEGMSYLHHYSPVKVVHCDLKPSNILLDEDMTALVTDFGISRLVQSDENTSINESASFSSTHGLLCGSVGYIAPEYGMGKHASTEGDVYSFGVLVLEMVSGRRPTDVLSHEGSSLCEWIKKQYTHQHQLENFVEQALQRFSPCGVPNHRNKIWKDVILELIELGLVCTQYNPSTRPSMHDIAQEMERLKDYLTKSNLPPH* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1757 974 Gene3D Ribonuclease Inhibitor 36 198 IPR032675 -
Gso2g1757 974 SUPERFAMILY Protein kinase-like (PK-like) 653 959 IPR011009 -
Gso2g1757 974 Gene3D Ribonuclease Inhibitor 199 597 IPR032675 -
Gso2g1757 974 CDD STKc_IRAK 677 962 - -
Gso2g1757 974 ProSiteProfiles Protein kinase domain profile. 671 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1757 974 Pfam Protein kinase domain 673 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1757 974 Gene3D Phosphorylase Kinase; domain 1 650 745 - -
Gso2g1757 974 PANTHER OS04G0122200 PROTEIN 27 963 - -
Gso2g1757 974 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Gso2g1757 974 Pfam Leucine rich repeat 356 415 IPR001611 GO:0005515
Gso2g1757 974 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 27 963 - -
Gso2g1757 974 SMART LRR_typ_2 126 149 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 150 174 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 378 401 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 281 305 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 330 354 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 402 426 IPR003591 -
Gso2g1757 974 SMART LRR_typ_2 427 449 IPR003591 -
Gso2g1757 974 SUPERFAMILY RNI-like 83 368 - -
Gso2g1757 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Gso2g1757 974 Pfam Leucine Rich Repeat 428 446 IPR001611 GO:0005515
Gso2g1757 974 Pfam Leucine Rich Repeat 502 523 IPR001611 GO:0005515
Gso2g1757 974 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Gso2g1757 974 ProSiteProfiles Leucine-rich repeat profile. 428 449 IPR001611 GO:0005515
Gso2g1757 974 SUPERFAMILY L domain-like 277 578 - -
Gso2g1757 974 Gene3D Transferase(Phosphotransferase) domain 1 747 970 - -
Gso2g1757 974 SMART serkin_6 671 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1757 Gso-Chr2 41251802 41255473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1757 38 970 Receptor kinase-like Gene Family AT3G47570 34.660 2.90e-158 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso2g1757 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1757 - - gmx:100792446 1927.14