Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1751 ATGGCGACAAAAGAAGGCAAAGCCATAGGCATAGACCTCGGCACGACCTACAGCTGCGTGGGCGTGTGGCAAAACGACCGCGTTGAGATCATCCCCAACGACCAAGGCAACAGAACCACCCCCTCCTATGTCGCCTTCACCGACACCGAGAGGCTCATCGGAGACGCCGCGAAGAACCAAGTCGCGATGAACCCGCAGAACACCGTCTTCGACGCCAAGCGTTTAATCGGTCGCAGATTCTCAGACTCTCCTGTTCAAAACGACATGAAGCTGTGGCCGTTTAAGGTCGTGGCGGGACCGGGCGACAAGCCCATGATCGTGGTCAATTACAAAGGCGAGGAGAAGAAATTCTCTGCGGAGGAGATATCTTCAATGGTGTTGGTGAAGATGAGAGAAGTAGCAGAGGCGTTTCTCGGACACGCGGTGAATAACGCGGTTATCACTGTCCCTGCTTACTTCAACGACTCTCAGAGGCAGGCGACGAAGGACGCAGGGGCAATTTCGGGTTTGAATGTGTTGAGGATTATCAATGAACCTACCGCTGCTGCCATCGCGTATGGATTGGATAAGAAGGCTTCGAGAAAAGGTGAACAGAACGTGCTTATTTTCGACCTTGGTGGTGGCACTTTTGATGTTTCGATATTGACCATCGAGGAGGGGATTTTCGAAGTGAAGGCCACTGCTGGTGATACTCATCTTGGAGGTGAAGATTTTGATAACAGAATGGTGAATCACTTTGTTTCTGAATTCAGAAGGAAGAACAAGAAGGACATTAGTGGGAATGCTAGAGCGTTGAGAAGGTTGAGGACAGCGTGTGAGAGAGCAAAGAGAACACTCTCTTCTACCGCGCAGACAACTATTGAAATCGATTCTTTATACGAAGGGATTGATTTCTATGCTACAATCACGAGGGCGAGGTTTGAGGAAATGAACATGGATTTGTTCAGGAAGTGCATGGAGCCGGTGGAGAAGTGTTTGCGTGATGCCAAGATAGACAAGAGTCATGTTCATGAGGTTGTGCTTGTTGGAGGGTCCACTAGGATCCCCAAGGTTCAGCAACTCTTGCAGGATTTCTTCAATGGGAAAGAGCTTTGCAAGAGCATTAACCCCGATGAAGCTGTTGCATACGGTGCTTCAGTTCAAGCTGCCATCTTGAGCGGTGAAGGAGACGAGAAGGTTCAGGATTTGTTGCTGCTGGATGTTACACCTCTCAGTCTCGGGCTCGAAACTGCGGGTGGTGTTATGACTGTACTAATTCCGCGGAACACTACAATTCCCACCAAGAAGGAGCAGATTTTCTCAACCTATTCCGATAACCAACCCGGGGTGTTGATCCAAGTGTTCGAAGGAGAACGAGCTAGAACAAAGGACAACAATCTTCTTGGGAAGTTTGAGCTTACTGGGATCCCTCCAGCACCAAGAGGAGTGCCTCAGATCAATGTCTGCTTCGACATCGACGCTAACGGGATTCTGAATGTCTCTGCAGAGGACAAGACTGCTGGTGTGAAGAACAAGATCACGATCACCAACGACAAGGGTAGGCTGAGCAAGGAGGAGATTGAGAAGATGTTGAAGGATGCAGAGAGGTACAAGGCGGAGGATGAAGAGTTGAAGAAGAAGGTGGAGGCGAAAAACTCGCTTGAGAACTACGCGTATAATATGAGAAACACAATAAAGGATGAGAAGATTGGAGAGAAGTTGAGCCCGGATGAGAAGGAGAAGATTGAGAAGGCTGTGGAGGATGCGATACAGTGGTTGGAGGGGAACCAGTTGGCGGAAGTGGATGAGTTTGAGGACAAGCAGAAGGAGTTGGAAGGGATCTGCAACCCCATCATTGCGAAAATGTACCAGGGTGCTGCTGCTAGACCTGGTGGAGATGTTCCTACGGGTGATGATGACATGCCTGGTGCTGGTGGTGCTGGTTCTGGCGCGGGACCTAAGATTGAAGAAGTTGACTAA 1959 0.4962 MATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSPVQNDMKLWPFKVVAGPGDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVNNAVITVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFRRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSHVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGASVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMLKDAERYKAEDEELKKKVEAKNSLENYAYNMRNTIKDEKIGEKLSPDEKEKIEKAVEDAIQWLEGNQLAEVDEFEDKQKELEGICNPIIAKMYQGAAARPGGDVPTGDDDMPGAGGAGSGAGPKIEEVD* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1751 652 CDD HSPA1-2_6-8-like_NBD 8 386 - -
Gso2g1751 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 544 IPR029047 -
Gso2g1751 652 Gene3D - 9 383 - -
Gso2g1751 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 542 623 IPR029048 -
Gso2g1751 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Gso2g1751 652 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 3 624 - -
Gso2g1751 652 Gene3D Actin; Chain A, domain 4 234 317 - -
Gso2g1751 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 548 IPR029047 -
Gso2g1751 652 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Gso2g1751 652 Coils Coil 517 547 - -
Gso2g1751 652 Gene3D - 191 365 - -
Gso2g1751 652 Pfam Hsp70 protein 8 617 IPR013126 GO:0005524|GO:0140662
Gso2g1751 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gso2g1751 652 PANTHER HEAT SHOCK PROTEIN 70KDA 3 624 IPR013126 GO:0005524|GO:0140662
Gso2g1751 652 SUPERFAMILY Actin-like ATPase domain 195 387 IPR043129 -
Gso2g1751 652 Gene3D - 70 125 - -
Gso2g1751 652 MobiDBLite consensus disorder prediction 620 652 - -
Gso2g1751 652 Gene3D - 545 618 IPR029048 -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 7 20 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 35 47 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 57 65 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 145 165 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 208 218 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 336 352 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 368 388 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 395 414 - -
Gso2g1751 652 PRINTS 70kDa heat shock protein signature 476 492 - -
Gso2g1751 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1751 Gso-Chr2 41181277 41183722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1751 1 652 Calmodulin-binding Proteins AT1G16030 85.736 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1751 K03283 - gmx:100790356 1267.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1751 2 41181277 41183722 Gso13g0999 13 24377080 24380073 GST
Gso19g1432 19 43229346 43232244 Gso2g1751 2 41181277 41183722 PCT
Gso3g1440 3 40419890 40422848 Gso2g1751 2 41181277 41183722 PCT
Gso2g1751 2 41181277 41183722 Gso19g1432 19 43229346 43232244 PCT
Gso2g1751 2 41181277 41183722 Gso3g1440 3 40419890 40422848 PCT