Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g1735 | ATGGACCAGCGCCACAGCCCCCAACCTCTCCCAGAGTCAGACACCCAAGGAAACGATTCTCACCCAAAAACGCAACTCACCAAGGAAACAGAACGAGTTGTGGAATCGCTGTCCGACGCCGAGTCGCGGCATGGCGAGTTACGGAGCTCCGACAAACCTTGTTCGGACTCCAATTTAGAAACCCTAGGCGCTGGTGTTACCTCTTCGGTTGAAACCCTTGCTGTGCAGCATCGGAGTGACGATTTGCAAGGGAGCTCTACTGCTCCGAATTCGGGTGGCAAAGCCGAAAGTAAGGAGACAGTTGAATCTCCTGAAAAGGAAACTATTGAAAGAGGAGCAGTGCAGCCACTCCAAACTCAGACAGAAAATCGGCTTCAGGTGTCTGTGTGTTCAATTCCATTGTCTGATCTATCACCAACTTCTGTTACACAATCTTTATCAATTGTTTCTAGTCCAACCGTACAAAAACAGAAAATATCTACTCCAAAGGTCAATAACACACATGTGCCAGAAGTAGATAGGAAAAATCCTTCTGGTCGCAAAACGTTATCTGCTGTTTCTGTTGCAAGGACATCAGCATCTGACGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATGATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCTCCGCGGAAGACTAATTCCATTAGGGAAAATAAGTTTCTGTCTTCCAGTGAACCTATTGTAGAAAACAGTGTACCGGAGCAGCCTGTCAGAGTTCTGAAGGATGCTGATCCATCCATTTCTTCAAAAGAATCTCTACAAGAAGCACCCTGCAGCAATGATAAGAAACGACAAAATACATCTAATATCAGTGGTAATGATAAAGTTATTTTGAAAGAGGAACATGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGAAATGGATTCTCCAGTAAAACCTGGAAAAAAGCCCAAGTTCGTTGTACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAAGGAAATCCACATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAGACCGCAGTAGATAACTCAGATGCCGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCAGTCCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCTGACTCCCCACAAAACAAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTGACCGGGGAAGCGCTAGAGCTTGGAGGTGAGAAAGCAATGGAGTCAGCTCGAACACTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTAA | 1518 | 0.4559 | MDQRHSPQPLPESDTQGNDSHPKTQLTKETERVVESLSDAESRHGELRSSDKPCSDSNLETLGAGVTSSVETLAVQHRSDDLQGSSTAPNSGGKAESKETVESPEKETIERGAVQPLQTQTENRLQVSVCSIPLSDLSPTSVTQSLSIVSSPTVQKQKISTPKVNNTHVPEVDRKNPSGRKTLSAVSVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDDSGHVIEIVYKSEHSHDPPRKTNSIRENKFLSSSEPIVENSVPEQPVRVLKDADPSISSKESLQEAPCSNDKKRQNTSNISGNDKVILKEEHVNEPEPKKRMKKGDLTEMDSPVKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKISTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g1735 | 505 | SUPERFAMILY | WRKY DNA-binding domain | 362 | 426 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | ProSiteProfiles | WRKY domain profile. | 188 | 252 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | SUPERFAMILY | WRKY DNA-binding domain | 190 | 252 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 318 | 351 | - | - | |
Gso2g1735 | 505 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 19 | 503 | - | - | |
Gso2g1735 | 505 | Gene3D | WRKY domain | 180 | 253 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | Gene3D | WRKY domain | 351 | 427 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 24 | 53 | - | - | |
Gso2g1735 | 505 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 19 | 503 | IPR044810 | GO:0003700 | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 269 | 353 | - | - | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 1 | 120 | - | - | |
Gso2g1735 | 505 | Pfam | WRKY DNA -binding domain | 368 | 423 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | Pfam | WRKY DNA -binding domain | 195 | 249 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | SMART | WRKY_cls | 193 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | SMART | WRKY_cls | 366 | 425 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 54 | 97 | - | - | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 290 | 317 | - | - | |
Gso2g1735 | 505 | ProSiteProfiles | WRKY domain profile. | 361 | 426 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1735 | 505 | MobiDBLite | consensus disorder prediction | 157 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g1735 | Gso-Chr2 | 41021433 | 41029025 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g1735 | 80 | 505 | WRKY Transcription Factor Family | AT4G30935 | 54.484 | 1.42e-140 | 411 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso2g1735 | WRKY | 2.3e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g1735 | - | - | gmx:100782194 | 976.081 |