Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1733 ATGGGGTTGGGAGTGTTTGGTTCTGTTCTGGTTTTGGCTCTCTTATTCAAGCATTTGGCATCTCAGCAACCGAATACTGATGAATTCTTTGTGTCTGAGTTCTTGAAGAAGATGGGTTTAGCATCTTCCCAAGGCTACAACTTCTCTGCTTCTGTCTGTTCATGGCAAGGGGTTTCTTGTGATGCCAATGGAGAACATATTGTTGACTTAGTCTTTTCTGGTATGGACCTTTCTGGCACTATGCCTGACAACACCATTGGCAAGCTAAGCAAACTTCAATCTTTGGATCTTAGCCACAACAAAATCACTGGCTTGCCTTCAGATTTCTGGAGTTTAAGCTCTCTCAAGAGCCTTAACCTGTCCTCCAATCAGATTTCTGGCTCATTGACTAACAACATTGGCAACTTTGGTTTGCTAGAAAGCATTGACTTGTCCAGCAACAATTTCTCAGAGGAAATTCCTAAAGCTGTTAGCTCACTGCTGAGTCTGAGGGTCCTCAAACTTGACCACAACAGGTTTGCACACAGCATACCTTCTGGGATTCTCAAGTGCCAGTCTCTAGTTTCAATTGATGTTTCTTCAAATCAGCTGAATGGAACACTTCCAGAAGGTTTTGGCGCTGCTTTTCCTAAACTTAGGGTCTTGAACCTTTCTGGGAATAATATGTATGGTCATGTTTCAGATATTTCTGGGTTAAAGTCCATTGTGAATCTCAACATATCAGGGAATTCGTTTCAGGGTTCTATTGTGGATGTGTTTCAGGGAAGATTGGAGGTTCTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTCCACAGGTACTACACAACTTTAGTAGTTACAATTGGTCTCATTTAGTTTACCTTGATTTGTCAGAGAATAATCTTAGTGGGGATTTTTTTCAAAATTTGAATGAGTCCCTGAATTTAAAACACATTAATCTTGCACACAATAGATTTACCAAACAGAAATTCCCACAAATTGAAATTCTCCTGAAATTGGAATATCTGAACTTGTCCAAAACTAGCCTTGTTGGTGAAATTCCTGATGAAATCTTACAAATGAGTAATTTGAGTGCACTTGATCTTTCTATGAATCATCTTAGTGGGAAAATTCCCTTGCTGAGGAATGAACACCTCCAAGTCCTTGACCTTTCAAACAACAATTTGACTGGAGCAGTCCCTCCATCTGTCTTGGAGAAACTCCCATGGATGGAGAAGTACAACTTCTCTTATAATAACCTAATCCTCTGTGCTTCTGAAATCAAACCTGAGATCCTGACAACAGCATTCTTTGGATCATTGAACAGTTGTCCAATTGCTGCAAATCCACGACTCTTCAAAAGGAGAGACACTGGAAACAAGGGAATGAAGCTAGCCCTGGCATTAAGCTTCTCAATGATCTTTGTGCTTGCTGGCCTTCTGTTTTTAGCATTTGGTTTCAGAAGGAAAACAAAAATGTGGGAATTCAAGCAAACTTCATACAAAGAAGAGCAAAACATTTCAGGTCCCTTTTCATTCCAGACTGATTCAACAACTTGGGTAGCTGATATTAAGCAAGCAACATCAGTCCCAGTAGTAATCTTTGAGAAGCCTTTGTTGAATATCACATTTGCAGACCTCTTGGCTGCAACTTCAAATTTTGATAGGGGCACCCTTTTGGCTGAAGGAAAATTTGGGCCGGTCTATAGAGGCTTTCTGCTTGGTGGCGTTCATGTGGCGGTTAAGGTTTTGGTTGTTGGTTCTACATTGACCGATGAAGAGGCTGCAAGAGAGCTAGAATTTCTTGGTAGAATCAAGCACCCCAACCTTGTTCCTTTAACTGGATATTGTGTAGCTGGGGACCAGAGAATTGCCATATATGATTACATGGAGAATGGTAACTTGCAAAACCTGCTTTATGACTTGCCACTTGGGGTACAAAGCACAGATGATTGGAGCACAGACGCATGGGAAGAAGCCGACAACAATGGTATTCAAAATGCTGGCTCTGAAGGGCTACTCACATCTTGGAGATTTCGCCACAAAATCGCCCTTGGCACGGCTCGAGCATTGGCCTTTTTGCATCATGGTTGCTCACCTCCAATAATCCACAGAGCTGTTAAGGCTAGCAGTGTCTATTTAGACTATGACTTGGAGCCAAGGTTGTCTGATTCTGGGTTGGCCAAGATTTTTGGAAGTGGCTTGGATGATGAAATTGTGCGTGGCTCGCCTGGTTATGTTCCACCAGAGTTTACTCGACCAGAATTGGACACTCCAACACCAAAATCTGATGTGTACTGTTTTGGGGTGGTGCTCTTTGAGCTAGTGACTGGAAAGATGCCAGTTGGAGATGATTACCCTGATGATAAAGAAGCAACTTTGGTAAGTTGGGTGAGAGGACTTGTAAGAAAGAACCAAGCTTCAAGAGCTATCGATCCGAAAATTCACGACACAGGACCAGATGAACAAATGGAAGAGGCTCTTAAGATTGGTTATCTTTGCACTGCTGACCTTCCCTTCAAGCGACCAAGCATGCAACAGATAGTTGGACTTCTAAAGGATATTGAACCTACTGCTAGTTAG 2565 0.4211 MGLGVFGSVLVLALLFKHLASQQPNTDEFFVSEFLKKMGLASSQGYNFSASVCSWQGVSCDANGEHIVDLVFSGMDLSGTMPDNTIGKLSKLQSLDLSHNKITGLPSDFWSLSSLKSLNLSSNQISGSLTNNIGNFGLLESIDLSSNNFSEEIPKAVSSLLSLRVLKLDHNRFAHSIPSGILKCQSLVSIDVSSNQLNGTLPEGFGAAFPKLRVLNLSGNNMYGHVSDISGLKSIVNLNISGNSFQGSIVDVFQGRLEVLDLSRNQFQGHIPQVLHNFSSYNWSHLVYLDLSENNLSGDFFQNLNESLNLKHINLAHNRFTKQKFPQIEILLKLEYLNLSKTSLVGEIPDEILQMSNLSALDLSMNHLSGKIPLLRNEHLQVLDLSNNNLTGAVPPSVLEKLPWMEKYNFSYNNLILCASEIKPEILTTAFFGSLNSCPIAANPRLFKRRDTGNKGMKLALALSFSMIFVLAGLLFLAFGFRRKTKMWEFKQTSYKEEQNISGPFSFQTDSTTWVADIKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLLGGVHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDAWEEADNNGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDSGLAKIFGSGLDDEIVRGSPGYVPPEFTRPELDTPTPKSDVYCFGVVLFELVTGKMPVGDDYPDDKEATLVSWVRGLVRKNQASRAIDPKIHDTGPDEQMEEALKIGYLCTADLPFKRPSMQQIVGLLKDIEPTAS* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1733 854 Gene3D Transferase(Phosphotransferase) domain 1 624 853 - -
Gso2g1733 854 Pfam Protein tyrosine and serine/threonine kinase 552 844 IPR001245 GO:0004672|GO:0006468
Gso2g1733 854 SUPERFAMILY Protein kinase-like (PK-like) 525 846 IPR011009 -
Gso2g1733 854 Gene3D Ribonuclease Inhibitor 30 178 IPR032675 -
Gso2g1733 854 SMART LRR_typ_2 89 111 IPR003591 -
Gso2g1733 854 SMART LRR_typ_2 160 184 IPR003591 -
Gso2g1733 854 SMART LRR_typ_2 112 136 IPR003591 -
Gso2g1733 854 SMART LRR_typ_2 331 355 IPR003591 -
Gso2g1733 854 SMART LRR_typ_2 378 401 IPR003591 -
Gso2g1733 854 Gene3D Ribonuclease Inhibitor 376 430 IPR032675 -
Gso2g1733 854 Pfam Leucine rich repeat 82 125 IPR001611 GO:0005515
Gso2g1733 854 ProSiteProfiles Protein kinase domain profile. 548 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1733 854 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 851 - -
Gso2g1733 854 Gene3D Ribonuclease Inhibitor 279 375 IPR032675 -
Gso2g1733 854 Gene3D Ribonuclease Inhibitor 179 278 IPR032675 -
Gso2g1733 854 PRINTS Leucine-rich repeat signature 92 105 - -
Gso2g1733 854 PRINTS Leucine-rich repeat signature 112 125 - -
Gso2g1733 854 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 851 - -
Gso2g1733 854 Gene3D Phosphorylase Kinase; domain 1 508 623 - -
Gso2g1733 854 Pfam Leucine Rich repeat 377 392 IPR001611 GO:0005515
Gso2g1733 854 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Gso2g1733 854 SUPERFAMILY L domain-like 47 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1733 Gso-Chr2 41003817 41007205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1733 60 849 Receptor kinase-like Gene Family AT5G07280 31.678 1.27e-108 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gso2g1733 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1733 - - gmx:100787157 1667.13