Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1729 ATGGCTATGCTCCGCAAATTGTTCTTCCGCAAGCCTCCTGATGGACTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAGAGTGTACATGGATGGGATAGTTGGCCAACTAAGGGAGAACTTGCCTGATGCTTCGATTCTGATTTTCAATTTTCGCGAGGAAGATACGAAGAGTCAGATGGCAAATATCATGTCTGAGCATGACATTACTATCATGGACTATCCCCGGCATTACGAGGGTGTTCCAGTACTCAAAATGGAGCTCATTCACCACTTTTTGAGGTCAGGTGAAAGTTGGCTCTCTCTTAGCCAGCATAATGTGTTGCTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATACTGGGGAGCAGAGGACTCTGGATATGGTTTACAAGCAGGCTCCGCACGAGCTTTTGCATTTGTTGTCCCCGTTGAATCCAACCCCTTCCCAACTGAGGTATCTTTTGTATGTTTCCAGGAGGAATGTGGCCTTAGATTGGCCTCCCCTGGACAGGGCACTCATGTTGGACTGCATCATTCTCAGATTCTTCCCAAACTTTGATGGGGAAGGTGGTTGTCATCCCATTTTTAGAATTTATGGACAGGATCCCTTTAGTGCTGATAAAAATCCAAAAATGTTGTACTCAACACCGAAGAGAAGCAAAAGCGTCCGGGCCTATAAGCAGGGAGAGTGTGAACTTATCAAAATCGATATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGAGCATTAACTTGAATGGTAACATGGATCGTGAAAAGATGATGTTCCGAGTCATGTTCAACACAGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCCGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAAGGACTTCCAATTGAAGCATTTGCGAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCCAAGGCTGATGCTGCACTAAATGTGCTCCAACAGATGAGTGCTTCAGCTATGAATGACAGGTTGGATACAGTTTCTGATCAGTGTATGGAAAATGGCACTTTATTGCATGAAACAAGTCCTAGAATTCCTCAGGGGAATTTGAGTGAAGCAAGACAATCTTTATCCTCAACTAAGAGATCACCAGATAATGACATGAGTAGAAAAGAGGATAAGGCCAACAAGGTCGAGGGTATTCCACAACAGCCTAGTACATCTAACATCATCTATCAAGAGACAGCCATATCTTCAGAAAGAACCACGGAATCCAATAAATGTCCAACAGGACCGACAAATGTTGACATAAAACTGCAGGCACCTCATCCTGCCTTATCTTCTTCTGTTGATACTTCTTTTCCCCCTAGAACACCTCCTTTGCGGCCTCAATCCACTAGTGCTAAAGAAGTTCATGATTCTCCTCGCCAAACAGAATCACCCCCTTCTTATCTTTTGCCTTTGCAATCAAAACACCAAACACAAGACAGAAGTTCTATCCCTACACCTGGGACCCAATTGTCATCTACTTTTCATAGTAAGTCACCAGCAGACACCATTTCCCATCCTTCAGCTTCAGCAATTACTTCAACTCAGCCATCTCCTTTACTTTCTTCCAAAAATGTGAATGAGATTCCTCCTATTAGAACAAGACTAGAGTCTTCCCCTTCACGACCTCCAACTCCACCTCCTCCTCCTACCCCTCCACTGAAGGATCATAGACTAGTTCGAGCTAAACCTCCTCCACCTCCACATCCTCCTCCTCCTCCTCCAAAGAAAGAACTACATGTTAAAGCCGAACCCCTTCCTTCTCCTCTATCTCCTATGAATGTGGAGCCACAGGTTAGAGGTGGGCCCTCTCCACCCCCTCCCCCTCCACCAAAAGAGGAGCAACCTGTTACTTTTAATGCTCCTCCACCTCCTTGTCTCTCAGGGAAAGTTGCAGGTTCTACTATAGCACCACCACCACCACCACCACCTTCCTCAGATCACATTAATTCTTCATTGCAAAAGTCTCCACCTCCTCCTGCAGCACCTGCTCCTCCACCTCCTCCTGGGGCACCTGCTCCTCCACCTCCCCCTGGTGCACCTGCTGCTCCACCTCCTCCTGCTAAAGGAGGTCTAAAATCAGGCAGTCCATTTCCATTGTCTCTTTCTGTGAGTGGTGATGGGAATAATGTGTCAGGACCAACTAGTTCAAAGGGACGAATTCTATCACGTACGATCAGCTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCTGGCGAAGTTTCCAAGGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCTTCAGGTCCTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGCCCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCGTTGCATGATTTAATGAGCTCAGTTTTAGCACTGGAGGAGTCAGCACTAGACACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTTAAGGGTTATAATGGGGAAAAGGAGAAGTTAGGAAGATGTGAACAGTTCTTAATGGAATTGATGAAAGTACCACGGGTGGAATCCAAGCTCAGAGTTTTTTCGTTCAAGATTCAATTCAACTCTCAGGTTTCTGACCTTAGAAATAGCCTAAGTGTTGTGAATGCTGCTTCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAAGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCCCGGGATAAGAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTAGATGACCAACTGCCGGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCAATAAACAAAGGATTAGAAAAGGTGGTACAGGAACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCTTCACTATATTCCAGCGTGGGTAGGAACGTGGATAAATTGATTCTCTATTTTGGTGAAGATCCAGCTCGTTGCCCATTTGAGCAAGTTGTGTCAACTTTGCTCAACTTTACTAGGATGTTCAACAAAGCCCATGAAGAAAACCACAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGAAAATGAGAAAAAGAAATGTGAATCAGAAAGAATTTTACCTACAGCTATCCGTACTGGCAATGCCAAATAG 3630 0.4391 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYRVYMDGIVGQLRENLPDASILIFNFREEDTKSQMANIMSEHDITIMDYPRHYEGVPVLKMELIHHFLRSGESWLSLSQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQRTLDMVYKQAPHELLHLLSPLNPTPSQLRYLLYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPIFRIYGQDPFSADKNPKMLYSTPKRSKSVRAYKQGECELIKIDINCHIQGDVVIESINLNGNMDREKMMFRVMFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPIEAFAKVQEIFSHVDWMNPKADAALNVLQQMSASAMNDRLDTVSDQCMENGTLLHETSPRIPQGNLSEARQSLSSTKRSPDNDMSRKEDKANKVEGIPQQPSTSNIIYQETAISSERTTESNKCPTGPTNVDIKLQAPHPALSSSVDTSFPPRTPPLRPQSTSAKEVHDSPRQTESPPSYLLPLQSKHQTQDRSSIPTPGTQLSSTFHSKSPADTISHPSASAITSTQPSPLLSSKNVNEIPPIRTRLESSPSRPPTPPPPPTPPLKDHRLVRAKPPPPPHPPPPPPKKELHVKAEPLPSPLSPMNVEPQVRGGPSPPPPPPPKEEQPVTFNAPPPPCLSGKVAGSTIAPPPPPPPSSDHINSSLQKSPPPPAAPAPPPPPGAPAPPPPPGAPAAPPPPAKGGLKSGSPFPLSLSVSGDGNNVSGPTSSKGRILSRTISSKNNTKKLKPLHWLKLSRAVQGSLWAETQKSGEVSKAPEIDMSELESLFSAAVPSGPAKKSNVQSSAGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFKIQFNSQVSDLRNSLSVVNAASEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRARDKKMTLMHYLCKVLDDQLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFRKKLKDFLGSAEADVRSLASLYSSVGRNVDKLILYFGEDPARCPFEQVVSTLLNFTRMFNKAHEENHKQLELEMKKTAENEKKKCESERILPTAIRTGNAK* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1729 1209 PANTHER FORMIN-J 1 1192 - -
Gso2g1729 1209 SMART PTEN_C2_2 197 336 IPR014020 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 517 604 - -
Gso2g1729 1209 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Gso2g1729 1209 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 413 437 - -
Gso2g1729 1209 Pfam Formin Homology 2 Domain 799 1167 IPR015425 -
Gso2g1729 1209 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 768 798 - -
Gso2g1729 1209 SUPERFAMILY Formin homology 2 domain (FH2 domain) 869 1189 - -
Gso2g1729 1209 Coils Coil 1168 1196 - -
Gso2g1729 1209 Gene3D Formin, FH2 domain 794 1178 IPR042201 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 454 487 - -
Gso2g1729 1209 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 610 625 - -
Gso2g1729 1209 Coils Coil 1074 1094 - -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 413 798 - -
Gso2g1729 1209 ProSiteProfiles Formin homology-2 (FH2) domain profile. 795 1193 IPR015425 -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 438 452 - -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 1187 1209 - -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 669 693 - -
Gso2g1729 1209 MobiDBLite consensus disorder prediction 726 762 - -
Gso2g1729 1209 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Gso2g1729 1209 Gene3D - 196 340 - -
Gso2g1729 1209 SMART it6_source 795 1209 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1729 Gso-Chr2 40952320 40963485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1729 1 399 Protein tyrosine phosphatase (PTP) family AT5G58160 66.833 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1729 - - gmx:100786096 2258.8