Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1726 ATGAGTGAGAAAGAGAAAGGCAATAATAGTGAGGGACAGTCGACGTTGCTGCACGGCAAGTACGAGCTTGGTCGTGTGCTGGGGCACGGAACGTTCGCCAAGGTGTACCACGCGCGGAACCTGAATACAGGGCAGCACGTGGCCATGAAGGTGGTGGGAAAAGAAAAGGTGATAAAGGTCGGAATGATGGAGCAGGTGAAGAGGGAGATCTCGGTGATGAAGATGGTGAAGCACCAAAACATCGTCGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTATATTGCCATGGAACTCGTCCGCGGCGGAGAGCTCTTCAACAAGGTCTCTAAAGGCCGCTTAAAGGAGGACGTGGCAAGACTCTACTTCCAGCAGTTAATCTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAAAACCTCCTCCTGGACGAACACGGCAACCTCAAAGTCTCCGACTTCGGACTCACCGCTTTCTCCGAACACCTCAAGGAGGACGGGCTGTTACACACCACGTGCGGCACGCCTGCGTACGTGTCGCCTGAAGTGATAGCGAAAAAAGGCTATGACGGTGCCAAGGCTGATATATGGTCATGTGGTGTAATCCTCTACGTTCTCCTCGCAGGCTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTATAAAAAAATTTACAGAGGGGACTTCAAGTGTCCACCCTGGTTCTCTCTTGATGCCAGGAAGCTTGTCACCAAGCTTCTCGACCCGAATCCCAATACAAGGATTAGTATTTCCAAAGTGATGGAGTCTTCTTGGTTTAAGAAACCGGTGCCGAGGAAGCTTGCTGCCGAAAAGGTGGATTTGGAGGAGGAGAAGATTGAGAGCCAGCTGGAGACCATCAATGCTTTCCACATAATTTCCTTGTCGGAGGGGTTCAATTTGTCGCCCTTGTTCGAGGACAAGAGGAGGGAGGAGATGAGGTTCGCCACCGCGGGGACGCCCAGCACCGTCATTTCGCGGCTGGAGGAGGTGGCCAAGGCCGGGAAGTTCGACGTCAGGAGTAGCGAGACCAAGGTGAGGCTTCAGGGTCAGGAGCGTGGGAGGAAGGGGAAGCTGGCGATTGCCGCGGATATCTACGCCGTGACGCCGTCGTTTATGGTGGTGGAGGTCAAGAAGGACAATGGGGATACCTTGGAGTATAACCAGTTCTGCAGCAAACAGCTTCGCCCTGCGCTTAAGGATATCTTCTGGAATTCCTCCCAGAATTCCGCACCTGCTAGTGCTTGA 1293 0.5352 MSEKEKGNNSEGQSTLLHGKYELGRVLGHGTFAKVYHARNLNTGQHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKHQNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSEHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSLDARKLVTKLLDPNPNTRISISKVMESSWFKKPVPRKLAAEKVDLEEEKIESQLETINAFHIISLSEGFNLSPLFEDKRREEMRFATAGTPSTVISRLEEVAKAGKFDVRSSETKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSSQNSAPASA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1726 430 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Gso2g1726 430 Gene3D Kinase associated domain 1, KA1 297 420 - -
Gso2g1726 430 Pfam NAF domain 300 355 IPR004041 GO:0007165
Gso2g1726 430 CDD CIPK_C 303 415 - -
Gso2g1726 430 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1726 430 CDD STKc_SnRK3 20 274 - -
Gso2g1726 430 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1726 430 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 16 421 - -
Gso2g1726 430 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Gso2g1726 430 PANTHER - 16 421 - -
Gso2g1726 430 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1726 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Gso2g1726 430 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Gso2g1726 430 Gene3D Transferase(Phosphotransferase) domain 1 103 279 - -
Gso2g1726 430 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1726 Gso-Chr2 40908177 40909979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1726 5 422 CBL-interacting serine-threonine protein kinases AT4G30960 73.843 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso2g1726 Pkinase 9.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1726 - K07198 gmx:100781111 852.432