Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1721 ATGCTAGGGAAGAAGATGGTATCACTGAAGAAACTAGCCAAAAGGGTGAAGGGTGTTGGAGGAGCTGATCACTCGGACCCTCCCTACCAAGAATGTTTGCTAAAGGGGTATGAGGAAGATAAAGAATCACCCTCTAGCCCAACCCCAACAGGGTTTTTTGCACTTTATGTTGGTGAGGAGCGTCAGAGATATGTGGTACCAACCAGCTACCTCTCTCACCCTCTATTCAAGATGCTGCTGGAGAAGGCCTACAATGAATTTGGCTTTGCACAGAGGAATGGCCTAGTGGTGCCATGCAGTGTTTCCACATTTCAGGAGGTGGTGAATGCTATTGAATGCAACAATGGCAACTTTGACTTAGGCAAGATTTTTGAAGATTTTGCTTAG 387 0.4599 MLGKKMVSLKKLAKRVKGVGGADHSDPPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGNFDLGKIFEDFA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1721 128 Pfam Auxin responsive protein 31 110 IPR003676 GO:0009733
Gso2g1721 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 127 IPR003676 GO:0009733
Gso2g1721 128 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1721 Gso-Chr2 40817606 40818626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1721 38 114 Calmodulin-binding Proteins AT5G20810 51.899 6.33e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1721 K14488 - gmx:100782364 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1721 2 40817606 40818626 Gso10g0579 10 6632071 6635690 GST
Gso19g1593 19 44852449 44855914 Gso2g1721 2 40817606 40818626 PCT
Gso3g1612 3 42049035 42052560 Gso2g1721 2 40817606 40818626 PCT
Gso2g1721 2 40817606 40818626 Gso19g1593 19 44852449 44855914 PCT
Gso2g1721 2 40817606 40818626 Gso3g1612 3 42049035 42052560 PCT