Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1699 ATGAAGTTTTTTAATCTCTTGAAAAGCAGACATGTCAGATCCTGCTCCTCTCCTTCATCATGGGCCTGGCCATCCTGCCACCAACCCAAAACCCTCTCTTTCAGAGTCACCGCCACCAATACCAACAATAACAAAAACAACGATGATGATGACAACAACATGAGAGACATTAACTTAGCGTTAGTGTCACAAACTCCAGAATCGTTCTTCACCGAGTCACCAGACTCGGCGAGCTTCTCGACAACCTCGGAGTTCTCCCGTGGCGTGGACCCCATCGAGACGGTGATTCGCGGCCTGCGTTCGGATCGACTCTTCTTCGATCGGGACGATGCAAGCTTCATGTTAGAGGGCAAACCGACGACGACCAGCCACCTGGAGCCGTTCAAAAACAGCGTCGTTTTGACGATGGACTCGGAGGACCCTCACGTGGATTTCCGCAAGTCCATGGAGGAGATGGTGGAGACTCTCGGCGTCGAAGACTGGGAGAGTCTCGAGGACCTTCTGTGCTGGTACCTGCAGGCCAACGCCAAGAGCAACCATGAGTACATCATTGGCGCTTTCGTCGATTTGTTGTTCTATCTCGCTGTTCCAAATTCACCTTGCTCACAAGACTTTGAACATTCTCATTCTCGTCCTTTTTCTCCTTTATCGTTTTATAGTTCTTCTTCTTCTTCTTCTCCCTCATCTTCATGCAGCACTCGCTGTAATATAAAAGGTGAAGTGGAAGAGGAAGAGGAGGAGGTTGGTGCTTGTAGTTCTTCTTTTTCTTTAGCGCAGGGTAAGGAGGAGATTACACCTGAAGATGAAGTTGCTTCATCTTCTAACAACTGA 831 0.4874 MKFFNLLKSRHVRSCSSPSSWAWPSCHQPKTLSFRVTATNTNNNKNNDDDDNNMRDINLALVSQTPESFFTESPDSASFSTTSEFSRGVDPIETVIRGLRSDRLFFDRDDASFMLEGKPTTTSHLEPFKNSVVLTMDSEDPHVDFRKSMEEMVETLGVEDWESLEDLLCWYLQANAKSNHEYIIGAFVDLLFYLAVPNSPCSQDFEHSHSRPFSPLSFYSSSSSSSPSSSCSTRCNIKGEVEEEEEEVGACSSSFSLAQGKEEITPEDEVASSSNN* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1699 276 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 133 194 IPR006458 -
Gso2g1699 276 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Gso2g1699 276 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
Gso2g1699 276 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 237 - -
Gso2g1699 276 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 237 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1699 Gso-Chr2 40389822 40391073 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso2g1699 Ovate 2.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1699 - - gmx:100816044 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1699 2 40389822 40391073 Gso10g0670 10 8618099 8619248 GST
Gso19g1655 19 45486440 45487749 Gso2g1699 2 40389822 40391073 PCT
Gso3g1684 3 42725126 42726493 Gso2g1699 2 40389822 40391073 PCT
Gso2g1699 2 40389822 40391073 Gso19g1655 19 45486440 45487749 PCT
Gso2g1699 2 40389822 40391073 Gso3g1684 3 42725126 42726493 PCT