Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1696 ATGTCTAGTTCCAGAAAAAAACTGGTTCTGAATACCGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCAGAAGGCCCGGGCTCCTCCGGCACATATTCCACCCGAAGCGGAGGCCCAAGAAGCCCGCGTACCAGGCCCACGGGTTTCATTGGGACGACACCGCGACGAGCAGCAGCACCACCAACGCCTCCACCGCTGCCACGTTCTCGCCATGCTACGCGGAGGCCTCGGCGCAGTTCAGCAACTACGGGCGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCATACCTGGACTTCAGGCACTCTATGCTGCAGATGATACTGGAGAATGAGATATACTCTAAGGATGATCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAATTCGCCGGACCACCATGGTGTTATAGTGAGAGCGTTCACTGAGATCTGGAATGGAGTTTTCTCCGTGAGGAGGTCTGGTTCTTCCACTGGGTTCCACCTCAATCGAGTAACATTATCCTGGCATCAATCTAGTGGATGA 525 0.5543 MSSSRKKLVLNTVSVSLGCGSCRRPGLLRHIFHPKRRPKKPAYQAHGFHWDDTATSSSTTNASTAATFSPCYAEASAQFSNYGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVRRSGSSTGFHLNRVTLSWHQSSG* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1696 174 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso2g1696 174 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 156 IPR038933 GO:0045892
Gso2g1696 174 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Gso2g1696 174 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 156 - -
Gso2g1696 174 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 146 IPR006458 -
Gso2g1696 174 Pfam Transcriptional repressor, ovate 92 148 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1696 Gso-Chr2 40330778 40331882 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso2g1696 Ovate 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1696 - - gmx:100818531 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1696 2 40330778 40331882 Gso10g0671 10 8664969 8666035 GST