Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1672 ATGATGATGAAGAACCTTGTACTCTTCCTATGTTTGTGTTTCTTCACTCTCGTTGTTTCCGAAACGGACTCGAACGACGTGAAGATTCTGAACAGCTTCAAAAGAGGGTTGAATAACTCAGAGCTCTTACCATGGCCCGAAGAAGGAGGAGACCCGTGCGGGAGCCCTCCATGGAAATACATCTTCTGCAACGGCAACAGAGTCGCTCAGATTCAGACCAAGAACCTGGGCCTGGTGGGCCCACTCCCTCCAAACCTCAACGAACTCACCATGCTCGAGAATCTGGGTTTACAGAACAACAACCTTAACGGTCCTTTACCCTCCTTCAAGGGCTTAACCAATCTAAAATACATTTTTCTCGGTCACAACGACTTCGATTCGATCCCCGTAGATTTCTTCGAGGGATTGAAGAGTCTCGAGGTGTTGGCTTTGGATTACAACGAAAAACTAAATGCAAGTAATGGCGGGTGGAACTTCCCGGCAACGCTGGAGGATTCGGCGCAGCTGAGGAACTTGAGTTGCATGAGCTGTAATCTGGTGGGCCCCATTCCGGGGTTCTTTGGGGACATGGCGTCGCTGTCGGTGTTGCTGCTGTCGGGCAACAATTTAACCGGGGAGATTCCGGCGACGTTGAACGCCGTTCCGGCGTTGCAGGTTCTCTGGCTGAACAACCAGCGTGGAGAGGGACTCGGTGGGAAAATTGACGTCTTGGCGAGTATGGTTTCGTTGACGAGTTTGTTGCTTCGTGGGAACAGTTTTGAAGGGAGTGTACCTATGAACATTGGGGATTTGGTTTCTTTGAAGGATTTGGATCTTAATGGGAATGAGTTTGTTGGGTTGATTCCGAGTGGTTTGGGTGGAATGATATTGGATAAGTTGGATTTGAATAACAACCACTTCATGGGTCCGATCCCGGAATTTGCAGCGAGTAAAGTGAGTTATGAGAACAATGAATTTTGTGAGGCAAAGGCCGGGGTTATGTGTGCTTTTGAAGTGATAGTGTTGTTGGAGTTTCTTGGAGGGTTGGGGTATCCTTGGATTTTGGTTGATTCTTGGAGTGGAAATGACCCTTGTCACGGGCCATGGTTGGGGATAAGGTGCAATGGGGACGGAAAGGTGGACATGATTATTTTGGAAAAGTTTAATCTTAGTGGGACTTTGAGTCCTTCTGTTGCCAAGTTAGATTCTCTTGTTGAGATAAGGTTGGGAGGTAATGATATTAGTGGTACGATACCGAGTAATTGGACTAGTTTGAAATCTTTGACATTGTTGGATCTGAGTGGGAATAACATTTCGCGTCCCTTGCCGAGTTTTGGGAAAGGGTTGAAGCTTGTGATTGATGGGGATCCTCATGGAAGTGCCCCAGAAGGTTCTCTTTCTCTACCCGGGACTGGTTCGTCGTCTACAAAGGGTGAATCTCCTTCCACTGATAAGCATAATCCTAATCCATCTGAAGACTCTAGTCCCAATCCAAAGTCTAGTAGTTCTTTTGAGTCGAATAATTCTTCCAATGGGAAAAAAATAGTTCCAATTGTGGTTCCTATTGCAGGTGTTGCAGCTGCCGCTTTTGTGCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAAAAAGGGTGTCTCTGAGGGTCCAGGGTCATTGGTGATTCACCCTAGGGATGCTTCTGATCCGGACAACGTGCTGAAGATTGTTGTTGCTAACAACAGCAGTCGGAGTGTTTCCACGGTGACTGGAAGTGGGTCTGGGACTATGACTCGAAGTGGTGAGTCTCGTGTCATTGAAGCTGGGAACCTTGTGATATCGGTTCAGGTTCTTCGAAACGTGACCAAGAATTTTGCACGGGAGAACGAGGTTGGACGTGGTGGGTTTGGGGTCGTTTACAAGGGAGAACTGGAAGATGGGACTAAGATTGCGGTGAAACGAATGGAATCCGGTGTGATTACCAGCAAGGCTTTGGATGAATTTCAGTCTGAGATTGCAGTTCTATCTAAAGTCCGGCACCGGCATTTGGTTTCTCTTTTGGGTTATTCAGTTGAAGGTAAAGAAAGGATTCTAGTTTATGAGTATATGCCACAAGGGGCTCTCAGTATGCATCTCTTCCATTGGAAGAGCTTACAACTGGAGCCACTGTCTTGGAAGAGGAGGCTCAACATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATAGTCTGGCTCATCAGATCTTCATTCACAGAGATCTTAAGTCATCAAATATTTTACTTGGGGATGACTTTAGAGCAAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTGACCCGACTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAGTGACTGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGCGTTGTCCTAATGGAGCTGCTAACTGGATTAATGGCACTTGACGAGGATAGACCTGAGGAAACCCAATACTTGGCGTCGTGGTTCTGGCATATAAAATCAGACAAGGAGAAACTAATGGCTGCTATTGACCCGGCCCTCGACATAAAGGAAGAAATGTTCGATGTCGTCTCCATTGTTGCTGAGCTAGCTGGGCACTGCACTACCAGAGAACCAAACCGAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTTCGCCACTTGTTCAAAAATGGAAACCATTAGATGATGACACTGAGGAGTATGCTGGCGTAGATTACAGTCTTCCCCTTAACCAAATGGTGAAGGAGTGGCAGGAGACAGAAGGAAAGGACCTGAGCTATGTGGACCTACAAGACAGTAAGAGTAGTATCCCTGAAAGGCCTACTGGGTTAGCCGAGTCTTTTACTTCCATTGATGGCCGATGA 2874 0.4642 MMMKNLVLFLCLCFFTLVVSETDSNDVKILNSFKRGLNNSELLPWPEEGGDPCGSPPWKYIFCNGNRVAQIQTKNLGLVGPLPPNLNELTMLENLGLQNNNLNGPLPSFKGLTNLKYIFLGHNDFDSIPVDFFEGLKSLEVLALDYNEKLNASNGGWNFPATLEDSAQLRNLSCMSCNLVGPIPGFFGDMASLSVLLLSGNNLTGEIPATLNAVPALQVLWLNNQRGEGLGGKIDVLASMVSLTSLLLRGNSFEGSVPMNIGDLVSLKDLDLNGNEFVGLIPSGLGGMILDKLDLNNNHFMGPIPEFAASKVSYENNEFCEAKAGVMCAFEVIVLLEFLGGLGYPWILVDSWSGNDPCHGPWLGIRCNGDGKVDMIILEKFNLSGTLSPSVAKLDSLVEIRLGGNDISGTIPSNWTSLKSLTLLDLSGNNISRPLPSFGKGLKLVIDGDPHGSAPEGSLSLPGTGSSSTKGESPSTDKHNPNPSEDSSPNPKSSSSFESNNSSNGKKIVPIVVPIAGVAAAAFVLIPLYVYCFRKKKGVSEGPGSLVIHPRDASDPDNVLKIVVANNSSRSVSTVTGSGSGTMTRSGESRVIEAGNLVISVQVLRNVTKNFARENEVGRGGFGVVYKGELEDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGKERILVYEYMPQGALSMHLFHWKSLQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEETQYLASWFWHIKSDKEKLMAAIDPALDIKEEMFDVVSIVAELAGHCTTREPNRRPDMSHAVNVLSPLVQKWKPLDDDTEEYAGVDYSLPLNQMVKEWQETEGKDLSYVDLQDSKSSIPERPTGLAESFTSIDGR* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1672 957 MobiDBLite consensus disorder prediction 935 957 - -
Gso2g1672 957 Pfam Protein tyrosine and serine/threonine kinase 614 886 IPR001245 GO:0004672|GO:0006468
Gso2g1672 957 SMART serkin_6 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1672 957 Gene3D Ribonuclease Inhibitor 23 327 IPR032675 -
Gso2g1672 957 MobiDBLite consensus disorder prediction 459 502 - -
Gso2g1672 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Gso2g1672 957 SUPERFAMILY L domain-like 331 442 - -
Gso2g1672 957 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 957 - -
Gso2g1672 957 SUPERFAMILY L domain-like 22 305 - -
Gso2g1672 957 ProSiteProfiles Protein kinase domain profile. 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1672 957 SUPERFAMILY Protein kinase-like (PK-like) 593 896 IPR011009 -
Gso2g1672 957 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Gso2g1672 957 Gene3D Phosphorylase Kinase; domain 1 575 688 - -
Gso2g1672 957 PANTHER OSJNBA0070M12.3 PROTEIN 4 957 - -
Gso2g1672 957 Gene3D Ribonuclease Inhibitor 331 451 IPR032675 -
Gso2g1672 957 MobiDBLite consensus disorder prediction 453 502 - -
Gso2g1672 957 Pfam Leucine rich repeat 92 147 IPR001611 GO:0005515
Gso2g1672 957 Gene3D Transferase(Phosphotransferase) domain 1 689 908 - -
Gso2g1672 957 SMART LRR_typ_2 264 287 IPR003591 -
Gso2g1672 957 SMART LRR_typ_2 112 135 IPR003591 -
Gso2g1672 957 SMART LRR_typ_2 190 214 IPR003591 -
Gso2g1672 957 SMART LRR_typ_2 418 441 IPR003591 -
Gso2g1672 957 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Gso2g1672 957 Pfam Leucine rich repeat N-terminal domain 335 368 IPR013210 -
Gso2g1672 957 CDD STKc_IRAK 617 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1672 Gso-Chr2 39627843 39631722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1672 80 924 Receptor kinase-like Gene Family AT1G55610 29.484 1.39e-78 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso2g1672 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1672 - - gmx:100803759 1771.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1672 2 39627843 39631722 Gso10g0708 10 9685844 9690294 GST
Gso3g1701 3 42843470 42847309 Gso2g1672 2 39627843 39631722 PCT
Gso2g1672 2 39627843 39631722 Gso3g1701 3 42843470 42847309 PCT