Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1664 ATGCTTTTCCGTTTCAACTTCCCCTTCACGATCCGATCCTTCTTCATACCCCCTCCATGCATTCTTCTTTTCGTTCTCTTCTCTTTCACGTGCTTCAATTCCACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAACAATATCGTCATATCTCAGTGCCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATAGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAGGCAAACATCCCACATTGCTGTAAAAAGAACCCTATAGTTGTTGATTTACTTCCCGGAACACCTTACAACCAACAAATTTCAAACTGCTGCAAAGGTGGTGTACTCAGCTCGTGGGCACAGGACCAATCCAAGGCGGTTGCAGCATTTCAAGTCAGTGTAGGTAGTGCCAGTACCACTAACAAAACTGTCAAAGTGCCAAAAGATTTCACACTGAAAGCGCCCGGACCCGGTTACACGTGTGGGCCGGCAACAATTGTGAAACCAACTCAATTTTTACAACCAGACAAAAGGAGAGTGACCCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCAGTTGCTGTGTCTCGCTCTCATCTTTCTATGACAATACAGTTGTACCCTGCACTACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAATCAGGAGAATGTGTAGATCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTCAATTACGGGATGAATTATTCTGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAAGCAATAACTCCCTACGGGTCAATAAATGATACAGCAATGCTTTGGGGACTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAATCAGAGCTACTATTCAGAAAGGATAAATCAACCTTCACTTTTGACAAGGGCTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGCGACGTTTGTGTGATGCCGCCACCTGATGCTTATCCATGGTTACCTAATGCGGGTTCCAGGCAAATAGTTTCCCTGCTTGCTTTGGTGATGTCCTCTTTGGTAGCCTTGGTATTATATGCAGATACTTAA 1377 0.4379 MLFRFNFPFTIRSFFIPPPCILLFVLFSFTCFNSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMYNFQQYRHISVPGWSLGWTWAKKEVIWSMIGGQTTEQGDCSKYKANIPHCCKKNPIVVDLLPGTPYNQQISNCCKGGVLSSWAQDQSKAVAAFQVSVGSASTTNKTVKVPKDFTLKAPGPGYTCGPATIVKPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQRTPSCCVSLSSFYDNTVVPCTTCACGCQGNSSQSGECVDPDSPHLQSVVSNAGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYGMNYSDWNLVVQHPNFDNLTQLFSFNYKAITPYGSINDTAMLWGLKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRQIVSLLALVMSSLVALVLYADT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1664 458 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Gso2g1664 458 PANTHER PROTEIN COBRA 16 457 IPR006918 GO:0010215|GO:0031225
Gso2g1664 458 PIRSF COBRA 13 457 IPR006918 GO:0010215|GO:0031225
Gso2g1664 458 PANTHER COBRA-LIKE PROTEIN 16 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1664 Gso-Chr2 39318501 39323086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1664 21 457 COBRA Gene Family AT3G02210 72.831 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1664 - - gmx:100797383 970.689