Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1638 ATGGGAAACAACTGTGTTGGATCGAGAACCTCTTCTTCTAAAGACGGAACAAATGGCTCTTCTAATTCAAGTTCATTCTGGTGGTCACGTGGACACAAGAAAGATGCTTCTCATGCACACAAAAGTGGCAAAAAGAGTGCAAAAGCCGCAGAAACTGTTCAAAACAAGCCTCCGGAGATGGTGAAAATCGAGAGGGAGGATGTGAAGCCTCCTCATCAATCCAAAGAGACTAAACCGCCTTCGGAAGAAACAAAGGAGCAGCCAACAAAACCAAAGAGGCCACACAATGTGAAGAGGCTAGCAAGTGCAGGCCTCAAAACAGATTCTGTTTTGCAACGAAAAACCGGTAACCTTAAGGAGTTTTACAATTTGGGACCAAAGCTTGGACAAGGCCAGTTTGGAACCACTTTCCTTTGTGTGGAGAAGATCACTGGGAAAGAGTATGCATGCAAATCAATATTGAAGAGGAAGCTTTTGACAGATGAGGATGTGGAGGATGTAAGGAGGGAGATTCAGATAATGCACCACTTGGCTGGGAGTCCTAACGTGATCTCCATCAAGGAGGCTTTCGAGGACGCTGTCGCGGTTCATGTTGTTATGGAGCTCTGTGCAGGGGGTGAGTTGTTTGATAGGATTGTGGAAAGGGGGCATTACACTGAAAGAAAGGCTGCTAAGCTTGCAAGGACTATAGTTGGTGTGATTGAGTCTTGCCACTCCCTTGGAGTGATGCATAGGGATCTTAAGCCTGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTTAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTTGGTGATGTAGTAGGAAGTCCTTATTATGTAGCACCTGAAGTTCTACGTAAGCGTTATGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATAATCTACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGACATATTCGAGGCGATTTTGCATTCTGATCTTGATTTCTCATCGGATCCTTGGCCTGCTATATCTGAAAGTGCAAAAGACTTGGTTAGGAAGGTGCTTGTCAGAGATCCTACTAAAAGGATAACAGCTTATGAAGTTCTTCGTCACCCCTGGATTCAAGTTGATGGAGCTGCTCCAGACAAACCTCTGGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTATGCAATGAATAAACTCAAGAAAATGGCTCTCAGAGTTATAGCACAGAATCTTTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAAATGATAGACACAGACAACAGTGGTCAAATTACATTTGAAGAACTCAAGGTTGGACTGAAAATGTTTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAAGCAGCTGACGTTGATAACAGTGGCACAATTGAATATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGGTTGACAGGGAAGATCATTTAGTTGCGGCTTTCGCTTATTTTGATAAAGATGGAAGTGGATACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCGTTGGAGATGTCCGCTTGGAGGAAATGATCCGAGAAGCTGATCAAGATAATGATGGAAGAATAGACTACAATGAATTTGTGGCTATGATGCAGAAAGGCCATGCAGATTTGGGTAAGAGGGGTCGAAAGGGTAACACTAGTTTTAGAGTTGGATTTAGGGAAGCACCACCTGTACGTTAA 1764 0.4297 MGNNCVGSRTSSSKDGTNGSSNSSSFWWSRGHKKDASHAHKSGKKSAKAAETVQNKPPEMVKIEREDVKPPHQSKETKPPSEETKEQPTKPKRPHNVKRLASAGLKTDSVLQRKTGNLKEFYNLGPKLGQGQFGTTFLCVEKITGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFGDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWGESEQDIFEAILHSDLDFSSDPWPAISESAKDLVRKVLVRDPTKRITAYEVLRHPWIQVDGAAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKMFGANLNESEIYDLMQAADVDNSGTIEYGEFIAATLHLNKVDREDHLVAAFAYFDKDGSGYITQDELQQACEEFGVGDVRLEEMIREADQDNDGRIDYNEFVAMMQKGHADLGKRGRKGNTSFRVGFREAPPVR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1638 587 ProSiteProfiles EF-hand calcium-binding domain profile. 423 458 IPR002048 GO:0005509
Gso2g1638 587 Gene3D - 387 564 - -
Gso2g1638 587 CDD EFh 428 487 IPR002048 GO:0005509
Gso2g1638 587 CDD STKc_CAMK 121 379 - -
Gso2g1638 587 MobiDBLite consensus disorder prediction 1 105 - -
Gso2g1638 587 Pfam EF-hand domain pair 500 559 IPR002048 GO:0005509
Gso2g1638 587 Pfam EF-hand domain pair 428 488 IPR002048 GO:0005509
Gso2g1638 587 ProSiteProfiles EF-hand calcium-binding domain profile. 533 564 IPR002048 GO:0005509
Gso2g1638 587 MobiDBLite consensus disorder prediction 1 30 - -
Gso2g1638 587 ProSitePatterns Protein kinases ATP-binding region signature. 128 155 IPR017441 GO:0005524
Gso2g1638 587 ProSiteProfiles Protein kinase domain profile. 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1638 587 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Gso2g1638 587 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Gso2g1638 587 Gene3D Phosphorylase Kinase; domain 1 125 207 - -
Gso2g1638 587 SMART efh_1 499 527 IPR002048 GO:0005509
Gso2g1638 587 SMART efh_1 427 455 IPR002048 GO:0005509
Gso2g1638 587 SMART efh_1 533 561 IPR002048 GO:0005509
Gso2g1638 587 SMART efh_1 463 491 IPR002048 GO:0005509
Gso2g1638 587 CDD EFh 499 559 IPR002048 GO:0005509
Gso2g1638 587 Pfam Protein kinase domain 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1638 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Gso2g1638 587 MobiDBLite consensus disorder prediction 58 93 - -
Gso2g1638 587 SUPERFAMILY Protein kinase-like (PK-like) 122 381 IPR011009 -
Gso2g1638 587 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Gso2g1638 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 571 - -
Gso2g1638 587 SMART serkin_6 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1638 587 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Gso2g1638 587 PANTHER CALCIUM-DEPENDENT KINASE 25 571 - -
Gso2g1638 587 Gene3D Transferase(Phosphotransferase) domain 1 208 386 - -
Gso2g1638 587 ProSitePatterns EF-hand calcium-binding domain. 542 554 IPR018247 -
Gso2g1638 587 SUPERFAMILY EF-hand 419 559 IPR011992 -
Gso2g1638 587 ProSitePatterns EF-hand calcium-binding domain. 436 448 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1638 Gso-Chr2 38585037 38589690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1638 1 581 EF-hand Containing Proteins AT5G04870 69.218 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso2g1638 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1638 K13412 - gmx:100783079 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1638 2 38585037 38589690 Gso10g0745 10 10475735 10481433 GST
Gso2g1638 2 38585037 38589690 Gso19g1690 19 45840754 45845220 PCT
Gso2g1638 2 38585037 38589690 Gso3g1723 3 43083501 43087961 PCT