Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1620 ATGAGGGCCACGAGAAGGGTTGGAGTCCTAGTGGCAATAACAGTTTCTTTGGTCGTGGCTGCAGTTGCTGGAATACTAATAATACTTGAGATCAGACTTCAATATCAAATCAAATCAAATCAAAATAGTGGAATGCAAGTGGATGATATGGACCTACCAGTTTTTGACCTATCAACAATAGCTAAGGCCACTAGCAACTTCACAATCAAGAACAAAATTGGAGAAGGTGGTTTTGGATCTGTATACAGGGCTTTCAGCAAGCTCAGGACAAGGATTGACCAAATTCAAGAACGAAGTAAAATTGTTTGCAAAATTCAACACCGCAATCTTGTAAAGCTTCTTGGATGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAGTACATGCTTAATGGTAGCTTGGACTCATTTATTTTTGATGAGCAAAGAAGTGGATCACTGGACTGGTCAAAGCACTTCAACATTATATGTGGAATTGCCAAGGGCCTTCTCTTTCTTCATCAGGATTCTAGACTAAGGATTATCCACAAAGATCTCAAAGCAAGTAATGTTTTACTTGACAGTGAGTTGAACCCCAAAATTTCAGAGTTTGGCACGGCTAGAATTTTCGGTGTAGATCAGCAAGAAGGAAACACAAAGAGAATAGTTGGGACATACGGTTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTTTACTGCTGGAGATTATATTAGGAAAAAGAAGTAGAGAATATTACAATCAGAACCACAACGAATCTCATAGGCCATAA 810 0.3889 MRATRRVGVLVAITVSLVVAAVAGILIILEIRLQYQIKSNQNSGMQVDDMDLPVFDLSTIAKATSNFTIKNKIGEGGFGSVYRAFSKLRTRIDQIQERSKIVCKIQHRNLVKLLGCCLEGEEKMLVYEYMLNGSLDSFIFDEQRSGSLDWSKHFNIICGIAKGLLFLHQDSRLRIIHKDLKASNVLLDSELNPKISEFGTARIFGVDQQEGNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLLEIILGKRSREYYNQNHNESHRP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1620 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Gso2g1620 269 Gene3D Phosphorylase Kinase; domain 1 29 129 - -
Gso2g1620 269 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 264 - -
Gso2g1620 269 ProSitePatterns Protein kinases ATP-binding region signature. 73 104 IPR017441 GO:0005524
Gso2g1620 269 SUPERFAMILY Protein kinase-like (PK-like) 42 255 IPR011009 -
Gso2g1620 269 Gene3D Transferase(Phosphotransferase) domain 1 130 268 - -
Gso2g1620 269 SMART serkin_6 67 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1620 269 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 36 264 - -
Gso2g1620 269 Pfam Protein tyrosine and serine/threonine kinase 93 255 IPR001245 GO:0004672|GO:0006468
Gso2g1620 269 ProSiteProfiles Protein kinase domain profile. 67 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1620 Gso-Chr2 37783250 37788943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1620 7 266 Receptor kinase-like Gene Family AT4G23190 48.736 6.65e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso2g1620 PK_Tyr_Ser-Thr 3.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1620 - - gsj:114393283 530.406