Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1612 ATGATTGGATGTGTTAATTTATCGATTGCTGTTGCTGAGTTGAGCCTTGGTCTCCCATTCCATTTTCGGATCATCCCTAGCACTAAAAGCAACAACTCTTGCATTCTGAAGGTGACTATGGAGAAAGCAAATACATCACTAGTGAGAACAAAATCAGACCAACTAGTGGAGTCGATGGTGGCGGCCCTGAAGTCGCCAGCATCGAGCGACCACTCCGCGAACGGGGTGGTTGAAGGCGGGGGGACCATCTCCAGGAAGTCGAGCCGGCGGCTGACGGGGGCGTCACCGGGGCGCGGCGGGAAGAACACGCACATAAGGAAGTCTAGGAGTGCTCAGATAAGTCAAATGAAGCTGGAGCTCGATGATGTGAGTAGTGGTGCCGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCTTTCTCCTTCACTGGCTTCACTATGCCTCCTGAGGAAATTGCAGACTCCAAGCCCTTCAGTGATGATGATATCCCTGAGGATATTGAATCTGGACCTAGGACGAAGTTTCAAACAGAACCTACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAGGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTCTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTTTAAACCTTCTTGGAGGCAGGTTAAGCCATCCTATAAGTGGTGGTTCTATCACATACAATGACCAACCATATTCTAAGTTTCTTAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATACGCAGCCAGACTAAGATTACCAAAGACATACACAAAGGAGCAAAAGGAGAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAAGACATAGCAGAGGCTGGCAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAATTGATCCTTCTTGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGACTTACTTCCAGTCTATAGGATGTTCACCCCTTATTTCCATGAACCCAGCTGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAAGTGCAGATGGGAAATGCAGAAGCTGAAACACTAAATGGGAAGCCATCACCAGCAGTTGTACATGAGTACCTGGTGGAGGCATACGAAACTCGAGTAGCAGAAACAGAAAAGAAAAGACTAATGGTTCCTATACCCATTGATGAAGCACTGAAGACTAAGGTGTGTTCTCATAAGAGACAATGGGGAGCAAGTTGGGATGAGCAATATTCCATACTATTTTGGAGAGGAATCAAAGAACGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCTGTCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGATTGCTATTCTTTATTGCGGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTCCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGATATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAGTGCTTTTTCTGCTTGTTGTTTATTTCATGGCCGGTCTCAGACTCAGTGTTGCACCATTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGAGCCACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGAGTCCCCATATTTTTTTCTTGGATCCGGTACATGTCATTCAACTACCACACCTACAAGCTTCTGCTCAAGGTGCAATATGAACACATCTCACCAGTCATCAATGGAATGAGAATTGATAGTGGTGCAACAGAGGTAGCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGCGAATGAAACTTCAATCTGGAGCTTAA 2349 0.444 MIGCVNLSIAVAELSLGLPFHFRIIPSTKSNNSCILKVTMEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVVEGGGTISRKSSRRLTGASPGRGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIESGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETLNGKPSPAVVHEYLVEAYETRVAETEKKRLMVPIPIDEALKTKVCSHKRQWGASWDEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGMRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGA* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1612 782 Pfam ABC transporter 209 360 IPR003439 GO:0005524
Gso2g1612 782 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 186 432 IPR003439 GO:0005524
Gso2g1612 782 SMART AAA_5 218 409 IPR003593 -
Gso2g1612 782 ProSitePatterns ABC transporters family signature. 332 346 IPR017871 GO:0005524
Gso2g1612 782 Gene3D - 185 426 IPR027417 -
Gso2g1612 782 CDD ABCG_EPDR 183 414 - -
Gso2g1612 782 Pfam ABC-2 type transporter 389 450 IPR043926 GO:0140359
Gso2g1612 782 Pfam ABC-2 type transporter 527 736 IPR013525 GO:0016020|GO:0140359
Gso2g1612 782 MobiDBLite consensus disorder prediction 66 111 - -
Gso2g1612 782 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 776 - -
Gso2g1612 782 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 49 776 - -
Gso2g1612 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 424 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1612 Gso-Chr2 37154765 37174083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1612 208 446 Calmodulin-binding Proteins AT2G36910 29.796 3.48e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1612 K05681 - gmx:100798801 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1612 2 37154765 37174083 Gso10g0791 10 11243016 11254278 GST
Gso19g1696 19 45890485 45899746 Gso2g1612 2 37154765 37174083 PCT
Gso3g1729 3 43133068 43142570 Gso2g1612 2 37154765 37174083 PCT
Gso2g1612 2 37154765 37174083 Gso19g1696 19 45890485 45899746 PCT
Gso2g1612 2 37154765 37174083 Gso3g1729 3 43133068 43142570 PCT