Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1576 ATGTCAGACATTCTCAACAAAAATGAAGCCCCAGAAAACCAGAAATTTGAAGTCACATTTAGTAGGAAAAGTGTTGTAAAAGCACTCAACCCTTCACTAGAGCCATTTTCAATCACTCTCTCAAATCTTGACCTGCTCTCAGGTCGTTTTCCTGTTACATACTTGTATTTCTACCGCAAACTAGAATCAGATAACTTCAAAGCCTTTGTTGATGCTCTTAAGAACACTCTAGCACAAGTTCTTGATCACTACTATCCCTTTGCTGGCCAAATTGTTCAAAATCCCAAAACTAGTGAGCCTGAAATCATTTGTGACAACAATGGTGCTCTAGTCATTGAAGCTCACACAAATATCCCATTAAAGAGTTTAGATTTTTACAATCTCAATGAAACTCTTCAAGAAAAGGTAGTCTCAGTTGAACCAGACTTCCCCTTGCAAATTCAGGCGACTGAGTACACTTGTGGAGGCATTTCCATAGCATTTACTTTTGATCATGCATTAGGTGATGCCACTTCCTTTGGCAAGTTCATTGCTTCATGGTGCGAAATAGCTCAAAAGAAACCACTCTCGAGCATACCAGACCATACTAGACACCTTCGTGCGCGTTCTTCTCCCAAATATCAACCATCCTTGGATCAAACTTTTATGAAGTGCACCATGAAAGAGATACAGAACATGCCAATGAATCATGTCTTGCTTAAACGCCTTTATCACATCGAAGCATCAAGCATCGACATGCTGCAGAAACTTGCTTCTTTGAATGGGGTCAAGAGAACAAAGATTGAGGCCTTTTCAGCATATGTATGGAAGATAATGATTGGTACAATTGATGAAAGGCATAAAACGTGCAAGATGGGTTGGTTGGTGGATGGAAGAGAAAGAATGGGAAGAGGCAAGAATTTGATGTCAAACTACATTGGTAATGTGTTGTCTTTGGCTTTTGGGGAGGCAAGCATTCAAGAACTGAAGGAAGCCTCCATATCAGAAATTGCTAAGACAGTGCATGAGGCAATTTCAAAGGTCAATAATGAGGATCACTTCTTGGACTTGATTGATTGGATTGAGTGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTGTTGGGTCAAGAGGGGCCAACCCTAGTGGTGTCCTCAGGACAAAGGTTTCCTGTCAAAGAAGTTGACTTTGGATTTGGGAGTCCCTTGCTAGGGACAGTTTACACTTCCATTCAAAAGGTGGGAGTTAGTTACATGAACCAAAGGCTAAGTGCCAAGGGTGATGGTTCATGGACTGTGTCTGCCATCTTGTGGCCAGAACTGGAAGCTGCATTGCAGGATGACCCAATTTTCCACCCCATGTCTGCCTCTAATCTTCAACTTTAG 1365 0.4183 MSDILNKNEAPENQKFEVTFSRKSVVKALNPSLEPFSITLSNLDLLSGRFPVTYLYFYRKLESDNFKAFVDALKNTLAQVLDHYYPFAGQIVQNPKTSEPEIICDNNGALVIEAHTNIPLKSLDFYNLNETLQEKVVSVEPDFPLQIQATEYTCGGISIAFTFDHALGDATSFGKFIASWCEIAQKKPLSSIPDHTRHLRARSSPKYQPSLDQTFMKCTMKEIQNMPMNHVLLKRLYHIEASSIDMLQKLASLNGVKRTKIEAFSAYVWKIMIGTIDERHKTCKMGWLVDGRERMGRGKNLMSNYIGNVLSLAFGEASIQELKEASISEIAKTVHEAISKVNNEDHFLDLIDWIECHRPGLMLAKAVLGQEGPTLVVSSGQRFPVKEVDFGFGSPLLGTVYTSIQKVGVSYMNQRLSAKGDGSWTVSAILWPELEAALQDDPIFHPMSASNLQL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1576 454 Gene3D - 12 213 IPR023213 -
Gso2g1576 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 450 - -
Gso2g1576 454 Gene3D - 214 440 IPR023213 -
Gso2g1576 454 Pfam Transferase family 17 433 - -
Gso2g1576 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 39 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1576 Gso-Chr2 34526826 34528513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1576 41 433 Monolignol Biosynthesis Gene Families AT5G48930 26.570 1.96e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1576 - - gmx:100795616 909.442