Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1568 ATGGCCGAATCACTCCTTTTCTCCGTTGCAGAGTCACTGCTAGGGAAGCTTGCTTCTCGTGCCGTTGAAAAAGCTTCTCTGGCCATGGGGGTGTACCATGATCTACAACAGATGAGAGTGACTATGGCACTGGTCAAAGCCTTGCTGTTAGATGCTGAGCAAAAGAAGCAGCAGAACAATGCATTGAGCGAGTGGCTGAGACAGATTAAGCGCGTATTTTCGGATGCCGAAGACATAGTAGACAACTTTGAGTGTGAAGCGTTGCGGAAGCATGTTGTCAACACTCATGGTAGCGTCTCGAGGAAGGTACGTCGTTTGTTCTCAACTAGTAATCCTCTTGTTTATCGTTTAAGAATGGCACGTGAGATAAAAGGCATCAAGAACAGGTTAGAGAAGGTTGCAGCTGATAGGCACATGTTTGGCCTTCAAATTAATGACATGGATACTCGTGTCGTGCATAGGAGGGAAATGACTCATTCCCATGTAAATGCCTCAAATGTCATAGGAAGGGAAGATGATAAAAAGAAAATAATAGAGCTTTTGCTGCAAGATGGTAATGACACGAGTCCCTCTGTTATTTCTATCGAGGGATTCGGAGGCATGGGAAAGACCACGCTTGCAAAGTTGGTGTTCAATGACTTGATCATTGATGAATGTTTCCCGTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAACTTAGGAACGTGCTTATTAAAATCCTTAATTCTACTCCTAACCCGAGGAATGAAAACTTCAAAAACTTTGAGATGGAGCAACTTCAAAATCGTTTGAGAAATACTCTTCATCGTCAGAAGTTCTTGCTTGTCTTGGACGACGTATGGAACGAAAATCGTGTTAAATGGAATGAGTTGAAGGATATCATAGACATAGGTGTTGAAGGGAGCAAAATCCTAGTGACTACTCGTAGCCACGCAATAGCTGTCATGATGCGCACTAAATCGTCTAACTATTACCGTCTAGAAGGCCTTTCGGAAGAACATTCCTTATCTCTATTTCTCAAATCGGCTTTTGATGATGGAGAAGAGAGAAAACATCCACAATTGGTGGAGATTGGGAAAGAAATTCTGAAAAAATGTGGAGGGATACCGTTGGCAGTAAGAACACTAGGAAGTTCTCTAGTCTCAAGGGTTAATAGACAAGAGTGGGAGTCTCTAAGAGACAATGAGATTTGGAATTTACCACAAAATGAACAAGACATTTTGCCTGCTCTTGAATTAAGTTATGATCAACTACCTTCGTATTTAAAACGATGCTTTGCATGCTTCTCCCTTGCCCCTGAGGACTTTGATATTTCTAGTTTTTATGTTACATTACTGTGGGAGGCACTTGGTTTTCTTCCACAACCAAAGGAAGGTGAAACAATACATGATGTTGCCAATCAATTTTTGCGTGAACTATGGTTAAGATCTTTTCTTACAGATTTTCTAGACATGGGAAGTACTTGCAGATTTAAATTACATGATTTAGTGCGTGATCTTGCAGTGTATGTTGCAAAAGGTGAGTTTCAAATTTTATATCCCCACAGTCCAAATATATATGAGCATGCCCAACATTTGTCATTCACTGAAAATAATATGCTTGGCATTGATCTCGTTCCCATAGGTCTGAGAACTATAATTTTCCCTGTGGAAGCTACCAACGAAGCTTTCTTGTATACGTTGGTGTCGAGGTGCAAATACTTGAGAGTTTTAGACTTAAGTTATTCTAAATACGAGAGTTTGCCTTGCAGCATTGGAAAGTTGAAACACTTAAGATATCTTGATCTTTCGGGTAACCAAAAACTTGAGGAACTCCCTCATTCAATGTACAAGCTCCAGAATTTGCAAACTTTAGACCTCAGAGGATGCATAAAGCTACATGAATTGCCCAAAGGAATAAGAAAATTAATCAGCCTTCGTCAGCTGCTTGTAACCACAAGGCAACCAGAATTTCCAGATAAAGAGATTGCAAATTTGACTTCTATAGAAACATTAGAACTCCATTCTTGCAATAATTTGGAGTCATTGTTTGAAGAGATACAAATTTCTACTCTTAGATTTTTGAATTTTTCTGGTTGTGGGAGTCTAAAGTCTTTCTCGTTTCATGCCATTAAAAATTTAGAGAGTTTGGTTATCTTCAATTGTAGTAAGTTGGAATTGTCAATGGGCCTTGGCAATGAAATCCCTGCTTCAAGGTTAAAGTTACTTGTTCTTCAAAGTTTGTCACAACTGGTCACTTTGCCTCGGTGGTTGCGAGGATCTGCTAGCACATTGCATTCCTTGTTAATTGTTGGCTGTAACAATCTCGAAGAGCTTCCTGAATGGCTTTCTAATTTGAATTGTCTCAAACTACTTATGATTGAACATTGTCCAAAGCTGCTCTCACTCCCTGATAGCATGCATCACCTCACAAACCTTGAACATTTAGAAATTAATGATTGCCCTGAATTATGCAAAAGATGTCAGCCAGGAGTTGGACTAGATTGGCACAAAATATCACATATCAAACAAGTTATCATCGGTGAACCAGAAGAGTAG 2541 0.3975 MAESLLFSVAESLLGKLASRAVEKASLAMGVYHDLQQMRVTMALVKALLLDAEQKKQQNNALSEWLRQIKRVFSDAEDIVDNFECEALRKHVVNTHGSVSRKVRRLFSTSNPLVYRLRMAREIKGIKNRLEKVAADRHMFGLQINDMDTRVVHRREMTHSHVNASNVIGREDDKKKIIELLLQDGNDTSPSVISIEGFGGMGKTTLAKLVFNDLIIDECFPLKMWVCVSNDFELRNVLIKILNSTPNPRNENFKNFEMEQLQNRLRNTLHRQKFLLVLDDVWNENRVKWNELKDIIDIGVEGSKILVTTRSHAIAVMMRTKSSNYYRLEGLSEEHSLSLFLKSAFDDGEERKHPQLVEIGKEILKKCGGIPLAVRTLGSSLVSRVNRQEWESLRDNEIWNLPQNEQDILPALELSYDQLPSYLKRCFACFSLAPEDFDISSFYVTLLWEALGFLPQPKEGETIHDVANQFLRELWLRSFLTDFLDMGSTCRFKLHDLVRDLAVYVAKGEFQILYPHSPNIYEHAQHLSFTENNMLGIDLVPIGLRTIIFPVEATNEAFLYTLVSRCKYLRVLDLSYSKYESLPCSIGKLKHLRYLDLSGNQKLEELPHSMYKLQNLQTLDLRGCIKLHELPKGIRKLISLRQLLVTTRQPEFPDKEIANLTSIETLELHSCNNLESLFEEIQISTLRFLNFSGCGSLKSFSFHAIKNLESLVIFNCSKLELSMGLGNEIPASRLKLLVLQSLSQLVTLPRWLRGSASTLHSLLIVGCNNLEELPEWLSNLNCLKLLMIEHCPKLLSLPDSMHHLTNLEHLEINDCPELCKRCQPGVGLDWHKISHIKQVIIGEPEE* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1568 846 Gene3D - 148 324 IPR027417 -
Gso2g1568 846 Gene3D Ribonuclease Inhibitor 550 836 IPR032675 -
Gso2g1568 846 PRINTS Disease resistance protein signature 192 207 - -
Gso2g1568 846 PRINTS Disease resistance protein signature 268 282 - -
Gso2g1568 846 PRINTS Disease resistance protein signature 367 381 - -
Gso2g1568 846 PRINTS Disease resistance protein signature 611 627 - -
Gso2g1568 846 Pfam Rx N-terminal domain 10 96 IPR041118 -
Gso2g1568 846 CDD RX-CC_like 8 134 IPR038005 -
Gso2g1568 846 Pfam Leucine rich repeat 568 624 IPR001611 GO:0005515
Gso2g1568 846 Gene3D - 330 420 IPR042197 -
Gso2g1568 846 PANTHER OS08G0543100 PROTEIN 27 823 - -
Gso2g1568 846 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Gso2g1568 846 SUPERFAMILY L domain-like 493 838 - -
Gso2g1568 846 PANTHER DISEASE RESISTANCE PROTEIN RP 27 823 IPR044974 GO:0006952
Gso2g1568 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 429 IPR027417 -
Gso2g1568 846 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1568 Gso-Chr2 34116317 34121138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1568 193 794 WRKY Transcription Factor Family AT5G45050 24.174 4.28e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1568 - - gmx:100780033 1667.51