Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1561 ATGTTTAGTTTTCAGAAAATTTATCTTCTATTGACAGTGTTATTTCTGCTAGAGAAGCCTGTCATAAGCAAGGATCGGTGCAGGGAGAAGTGTGGACGCGTTCATATTGAATTTCCATTTTACCTCAGAAATAACAATTTGAGTCACACCACTGGCCATCATCCTGGGTTCGATCTGTTTTGTAACGATAAAGATGAGACTGTGCTGGAGCTCCCTGCTGTTCCAATTAAATTATTTGTAAAAAAAATAGATTACAAGTCTCAGCAAATCCAAATTTATGACCCTGAAAATTGCCTTCCCAAGGTGTTCTTAAAACTCGGTAATTACTCTATTTATCCATTCAAATTCCAATCAGTTCTTTCGGAGAAGTATAATGTTTCCTTCTTCTTTTGCAATTCAATTTTGTGCCCGATTTGGCGACTATCTAACTATCCATGGATTGATCCTGAATTGATATCTTGCACCAAGGTGGAAGATGTTTTGTCCGTGGAGTGGTTGGATGGTGAGGAGATCATGATCATGAACTCTATCTTGAAATGGTCAAAACCCAACTGTAATCAGTGTGAAGCACAAGGCCAGAAATGTAAATGGAAGAATGGTACCCAAGATGAAACTGAATGTTTCATTTGCCCAACAAACGCCATTCCAACATCAACTATTGTACTCATTGCTGCAGTTGGTTTGATGCTTTTTCTGCTACTGGTTAAAGCTTTGTTCTACATGTATGGATATTATAAGATAAAAGAAGAAGACCAGGCTCGGATAGAGAAATTCTTGGAGGATTATGCGGCAATGAAACCTACTAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGTTTAGGGGAAGGGGCACATGGAAAAGTGTTCAAAGGAATGCTCTCCCAACAAATTCTTGTTGCTGTGAAGATTCTCAATGACACAGTTGGAGATGGGAAGGACTTCATAAATGAAGTGGGAATCATTGGAAAAATTCATCACATTAACGTTGTTCGCTTGCTTGGATTCTGCGCAGATGGATTCCACCGAGCTCTTGTCTATGATTTCTTCCCGAATGGTTCTCTTGAAAAGTTCTTAGCACCACCGGACAACAACGATGTTTTCCTCGGTTGGGAGAAATTGCAACAAATTGCTCTTGGTGTTGCCACAGGGATTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTCGACATCAATCCTCACAATGTTTTACTAGATGACCACTTCCTCCCCATAATCACGGATTTTGGACTTGCCAAGTTGTGTCCCAAAAATCAAAGCACGGTGTCTATGACCGCAGCAAGAGGAACGTTAGGGTACATTGCCCCTGAAGTTTTCTCAAGAAACTTCGGTAACGTGTCTTACAAGTCTGACATTTACAGCTATGGAATGTTGTTGCTAGAGATGGTGGGAGGAAGAAAGAATACAAATATGTCAGCTGAGGAAATTTTCCAAGTTCTATACCCTGAATGGATCCATAATTTGCTGGAAGGTAGAGACTTTCAAGTTACTATTGAGGATGAGGGAGATGTTCAAATAGCAAAGAAACTGGCCATTGTAGGACTTAGGTGCATTCAGTGGAATCCAAGGGACCGCCCATCCATGAAAACTGTGGTACAAATGCTTAAAGGAGATGGAGATGATTTAATTGCACCTCCTACTCCTTTTGACATCACTGGTTCTTCTAGAACAAATGCTCTTGTTCCAATAAGACGTCAGAATTTCGAGTTGGAAGTTATTCATGAAATAGAAGAGTAA 1782 0.399 MFSFQKIYLLLTVLFLLEKPVISKDRCREKCGRVHIEFPFYLRNNNLSHTTGHHPGFDLFCNDKDETVLELPAVPIKLFVKKIDYKSQQIQIYDPENCLPKVFLKLGNYSIYPFKFQSVLSEKYNVSFFFCNSILCPIWRLSNYPWIDPELISCTKVEDVLSVEWLDGEEIMIMNSILKWSKPNCNQCEAQGQKCKWKNGTQDETECFICPTNAIPTSTIVLIAAVGLMLFLLLVKALFYMYGYYKIKEEDQARIEKFLEDYAAMKPTRFTYADIKRITNGFSESLGEGAHGKVFKGMLSQQILVAVKILNDTVGDGKDFINEVGIIGKIHHINVVRLLGFCADGFHRALVYDFFPNGSLEKFLAPPDNNDVFLGWEKLQQIALGVATGIEYLHLGCDHRILHFDINPHNVLLDDHFLPIITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSAEEIFQVLYPEWIHNLLEGRDFQVTIEDEGDVQIAKKLAIVGLRCIQWNPRDRPSMKTVVQMLKGDGDDLIAPPTPFDITGSSRTNALVPIRRQNFELEVIHEIEE* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1561 593 SUPERFAMILY Protein kinase-like (PK-like) 262 550 IPR011009 -
Gso2g1561 593 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Gso2g1561 593 Pfam Protein kinase domain 284 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1561 593 Gene3D Transferase(Phosphotransferase) domain 1 355 556 - -
Gso2g1561 593 ProSiteProfiles Protein kinase domain profile. 280 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1561 593 PANTHER RUST RESISTANCE KINASE LR10-RELATED 41 592 IPR045874 GO:0004672
Gso2g1561 593 Gene3D Phosphorylase Kinase; domain 1 253 354 - -
Gso2g1561 593 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 41 592 - -
Gso2g1561 593 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1561 Gso-Chr2 33810376 33812822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1561 54 563 Receptor kinase-like Gene Family AT1G66910 34.880 1.94e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso2g1561 Pkinase 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1561 - - gmx:102669457 1177.93